C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178852 EFCAB13 9606 + 17:47323290-47441312 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331493 EFCAB13-001 47323981-47441312 protein_coding
  ENST00000517310 EFCAB13-002 47323776-47374639 protein_coding
  ENST00000517484 EFCAB13-003 47324025-47430710 protein_coding
  ENST00000518081 EFCAB13-011 47329851-47340088 processed_transcript
  ENST00000518170 EFCAB13-006 47323290-47328371 protein_coding
  ENST00000518646 EFCAB13-010 47328048-47341451 retained_intron
  ENST00000519772 EFCAB13-009 47324025-47335326 protein_coding
  ENST00000520776 EFCAB13-004 47326339-47396021 retained_intron
  ENST00000520802 EFCAB13-008 47323961-47342027 processed_transcript
  ENST00000522326 EFCAB13-012 47377654-47394099 retained_intron
  ENST00000523285 EFCAB13-007 47323528-47335276 protein_coding
  ENST00000523842 EFCAB13-014 47377816-47414975 protein_coding
  ENST00000523978 EFCAB13-013 47369616-47374638 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000331493ENST00000517310ENST00000517484ENST00000520776ENST00000522326
Transcript ID Adrenal Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000331493 0.328±0.00 0.165±0.00 0.893±0.00 0.270±0.00 0.905±0.00 N/A N/A 0.156±0.00 N/A
ENST00000517310 N/A N/A N/A N/A N/A N/A N/A N/A 3.879±0.00
ENST00000517484 N/A 0.199±0.00 N/A N/A N/A N/A 1.035±0.00 N/A 2.028±0.00
ENST00000520776 N/A N/A N/A N/A N/A 1.614±0.00 N/A N/A N/A
ENST00000522326 N/A N/A N/A N/A N/A N/A N/A N/A 13.585±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HD CIL_0008HD_0001 VISTA 17:46991162-47592148
CIL_0006XZ CIL_0006XZ_0001 CGP 17:47253897-47441312

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000040838 Gm11639 predicted gene 11639 protein_coding Mus_musculus

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