C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 4B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179134 SAMD4B 9606 + 19:39342396-39385710 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314471 SAMD4B-001 39342468-39384926 protein_coding
  ENST00000594204 SAMD4B-013 39356708-39360148 processed_transcript
  ENST00000595476 SAMD4B-011 39378505-39381296 retained_intron
  ENST00000596271 SAMD4B-014 39385121-39385698 retained_intron
  ENST00000596319 SAMD4B-010 39369553-39375680 retained_intron
  ENST00000596368 SAMD4B-004 39356816-39385710 protein_coding
  ENST00000598605 SAMD4B-012 39380734-39383586 protein_coding
  ENST00000598913 SAMD4B-002 39342442-39384188 protein_coding
  ENST00000599712 SAMD4B-008 39354004-39370115 protein_coding
  ENST00000600018 SAMD4B-007 39370092-39376546 protein_coding
  ENST00000601613 SAMD4B-003 39349800-39352489 retained_intron
  ENST00000602243 SAMD4B-009 39342396-39369683 protein_coding
  ENST00000610417 SAMD4B-201 39356683-39384895 protein_coding
  ENST00000611159 SAMD4B-202 39356683-39384895 protein_coding
  ENST00000614559 SAMD4B-203 39342499-39384188 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314471ENST00000596271ENST00000596368ENST00000599712ENST00000601613ENST00000610417
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314471 N/A N/A N/A N/A N/A 0.551±0.00 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000596271 N/A N/A N/A N/A 17.936±0.00 N/A 2.269±0.00 N/A N/A N/A N/A 49.349±0.00 20.893±0.00 33.178±0.00
ENST00000596368 N/A N/A 2.046±0.00 N/A 4.659±0.00 N/A N/A 1.971±0.00 1.972±0.00 2.214±0.00 N/A N/A N/A N/A
ENST00000599712 N/A N/A N/A N/A N/A N/A N/A 4.822±0.00 3.566±0.00 1.712±0.00 N/A N/A N/A N/A
ENST00000601613 N/A N/A N/A N/A 2.015±0.00 1.377±0.00 0.221±0.00 0.460±0.00 1.133±0.00 1.286±0.00 N/A 2.703±0.00 N/A 2.974±0.00
ENST00000610417 8.990±0.00 9.484±0.00 N/A 14.432±0.00 4.950±0.00 8.131±0.00 3.555±0.00 7.487±0.00 1.446±0.99 3.247±2.88 6.982±0.00 18.364±5.44 9.640±2.03 12.969±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030602 Pak4 p21 protein (Cdc42/Rac)-activated kinase 4 protein_coding Mus_musculus

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