C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: p21 protein (Cdc42/Rac)-activated kinase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030602 Pak4 10090 - 7:28399549-28598185 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032823 Pak4-201 28558821-28568237 protein_coding
  ENSMUST00000040531 Pak4-202 28399549-28598144 protein_coding
  ENSMUST00000108283 Pak4-001 28558819-28598185 protein_coding
  ENSMUST00000135923 Pak4-002 28568245-28598155 processed_transcript
  ENSMUST00000150454 Pak4-003 28569299-28598086 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032823ENSMUST00000040531ENSMUST00000108283
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032823 N/A N/A N/A N/A N/A N/A N/A N/A 2.402±0.32 N/A 0.866±0.00 N/A 15.604±0.00 N/A
ENSMUST00000040531 11.079±1.09 19.951±1.03 11.551±1.22 10.697±4.79 10.498±3.95 16.751±5.26 4.100±1.30 10.690±1.32 4.545±1.38 10.880±0.50 1.889±0.31 14.859±4.75 20.272±15.04 40.168±4.06
ENSMUST00000108283 7.645±2.35 19.775±1.37 10.271±0.80 5.498±1.82 10.881±2.54 41.184±2.48 2.469±0.46 14.468±1.44 6.626±2.37 20.923±7.44 0.865±0.22 19.463±3.19 13.621±4.26 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006915 IEA apoptotic process
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000179134 SAMD4B sterile alpha motif domain containing 4B protein_coding Homo_sapiens

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