C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gem (nuclear organelle) associated protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179409 GEMIN4 9606 - 17:744414-753999 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319004 GEMIN4-001 744414-752261 protein_coding
  ENST00000437269 GEMIN4-003 746631-752174 protein_coding
  ENST00000570364 GEMIN4-005 747240-752776 protein_coding
  ENST00000573482 GEMIN4-007 747167-752185 protein_coding
  ENST00000574958 GEMIN4-006 747844-752038 protein_coding
  ENST00000576383 GEMIN4-004 747441-753999 protein_coding
  ENST00000576778 GEMIN4-002 744623-749351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319004ENST00000437269ENST00000573482ENST00000576383ENST00000576778
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319004 4.170±0.00 3.836±0.00 N/A 0.594±0.50 3.301±0.00 0.765±0.00 1.758±0.00 2.317±0.00 1.830±0.00 1.045±0.00 4.858±0.00 4.271±2.63 3.130±1.05 42.737±20.53
ENST00000437269 N/A N/A 0.536±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573482 N/A N/A N/A 0.387±0.00 N/A N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000576383 N/A N/A N/A N/A 1.802±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576778 1.166±0.00 1.482±0.00 N/A 0.554±0.10 0.571±0.00 0.960±0.50 0.398±0.09 0.106±0.00 1.122±0.00 0.681±0.38 N/A 1.689±0.58 1.491±1.29 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QB CIL_0001QB_0001 CGP 17:732412-753999

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000387 IDA spliceosomal snRNP assembly
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005730 TAS nucleolus
GO:0005737 TAS cytoplasm
GO:0005829 IDA cytosol
GO:0006364 TAS rRNA processing
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016070 TAS RNA metabolic process
GO:0030532 TAS small nuclear ribonucleoprotein complex
GO:0032797 IDA SMN complex
GO:0034660 TAS ncRNA metabolic process
GO:0034719 IDA SMN-Sm protein complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041252 gemin4 gem (nuclear organelle) associated protein 4 protein_coding Danio_rerio
ENSMUSG00000049396 Gemin4 gem (nuclear organelle) associated protein 4 protein_coding Mus_musculus

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