C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319004 GEMIN4-001 ENSG00000179409 9606 - 17:744414-752261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319004
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319004 4.170±0.00 3.836±0.00 0.594±0.50 3.301±0.00 0.765±0.00 1.758±0.00 2.317±0.00 1.830±0.00 1.045±0.00 4.858±0.00 4.271±2.63 3.130±1.05 42.737±20.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QB CIL_0001QB_0001 CGP 17:732412-753999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 IDA spliceosomal snRNP assembly
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005730 TAS nucleolus
GO:0005737 TAS cytoplasm
GO:0005829 IDA cytosol
GO:0006364 TAS rRNA processing
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016070 TAS RNA metabolic process
GO:0030532 TAS small nuclear ribonucleoprotein complex
GO:0032797 IDA SMN complex
GO:0034660 TAS ncRNA metabolic process
GO:0034719 IDA SMN-Sm protein complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102500 Gemin4-001 protein_coding Mus_musculus 0 2772
ENSMUST00000169701 Glod4-002 protein_coding Mus_musculus 0 2726
ENSMUST00000127340 Fam57a-004 processed_transcript Mus_musculus 0 2479

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