C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: testis development related protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180190 TDRP 9606 - 8:489792-545781 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324079 TDRP-001 489803-544998 protein_coding
  ENST00000427263 TDRP-201 489792-544845 protein_coding
  ENST00000523656 TDRP-002 489803-545781 protein_coding
  ENST00000524229 TDRP-004 492630-495010 processed_transcript
  ENST00000613071 TDRP-202 489792-545781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324079ENST00000427263ENST00000523656ENST00000524229ENST00000613071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324079 2.099±0.00 0.991±0.00 N/A 1.823±0.00 1.744±0.00 2.465±0.00 0.362±0.23 3.559±0.00 0.923±0.47 2.064±0.00 0.186±0.00 2.614±2.04 10.013±1.60 3.678±0.10
ENST00000427263 0.632±0.00 0.666±0.00 N/A N/A N/A N/A 0.049±0.00 1.413±0.04 0.640±0.00 N/A 0.135±0.00 N/A 14.437±0.00 1.759±0.00
ENST00000523656 N/A N/A N/A 0.856±0.00 0.386±0.00 N/A N/A N/A 0.571±0.00 2.565±0.00 N/A N/A N/A N/A
ENST00000524229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.917±0.00
ENST00000613071 N/A N/A 1.065±0.00 1.200±0.00 0.101±0.00 N/A N/A 0.943±0.00 0.534±0.00 0.950±0.00 N/A N/A 4.715±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VU CIL_0007VU_0001 VISTA 8:396943-1005350
CIL_0000LO CIL_0000LO_0001 CGP 8:406428-545781
CIL_0000LL CIL_0000LL_0001 CGP 8:489792-738106

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007283 IDA spermatogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000050052 Tdrp testis development related protein protein_coding Mus_musculus

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