C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin light chain, phosphorylatable, fast skeletal muscle
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180209 MYLPF 9606 + 16:30370934-30377991 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322861 MYLPF-001 30374777-30377991 protein_coding
  ENST00000563718 MYLPF-002 30370934-30376698 protein_coding
  ENST00000563728 MYLPF-004 30377563-30377991 retained_intron
  ENST00000566955 MYLPF-003 30375820-30377904 protein_coding
  ENST00000568749 MYLPF-005 30372318-30377702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322861ENST00000563718ENST00000563728ENST00000566955ENST00000568749
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322861 N/A N/A 0.062±0.00 89.625±89.05 N/A N/A 1.317±0.00 N/A 591.159±156.32 0.534±0.00 2.097±0.32 6.281±0.00
ENST00000563718 N/A N/A 0.096±0.00 N/A 0.285±0.00 N/A 0.076±0.00 0.178±0.00 N/A N/A N/A N/A
ENST00000563728 0.531±0.00 N/A 0.134±0.00 N/A N/A 0.242±0.00 N/A 0.939±0.00 N/A 0.652±0.36 0.416±0.21 0.178±0.00
ENST00000566955 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 0.098±0.00 N/A
ENST00000568749 N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V7 CIL_0003V7_0002 CGP 16:30357102-30377991

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005765 IDA lysosomal membrane
GO:0005859 TAS muscle myosin complex
GO:0006955 IEA immune response
GO:0007519 ISS skeletal muscle tissue development
GO:0008307 ISS structural constituent of muscle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002589 mylpfb myosin light chain, phosphorylatable, fast skeletal muscle b protein_coding Danio_rerio
ENSDARG00000053254 mylpfa myosin light chain, phosphorylatable, fast skeletal muscle a protein_coding Danio_rerio
ENSMUSG00000030672 Mylpf myosin light chain, phosphorylatable, fast skeletal muscle protein_coding Mus_musculus

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