C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003V7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078604-ENSDARG00000053254 CGP 7955 3:32931781-32955583
GeneTranscriptPositionBiotype
ENSDARG00000053254 (mylpfa)
myosin light chain, phosphorylatable, fast skeletal muscle a 		ENSDART00000075465 (mylpfa-001) 32950024-32955583 protein_coding
ENSDART00000142582 (mylpfa-002) 32950024-32954250 protein_coding
ENSDARG00000078604 (TBC1D10B)
TBC1 domain family, member 10B 		ENSDART00000114217 (TBC1D10B-201) 32931781-32948336 protein_coding
CIL_0003V7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169221-ENSG00000180209 CGP 9606 16:30357102-30377991
GeneTranscriptPositionBiotype
ENSG00000169221 (TBC1D10B)
TBC1 domain family, member 10B 		ENST00000409939 (TBC1D10B-001) 30357102-30370264 protein_coding
ENST00000464644 (TBC1D10B-006) 30359750-30365881 retained_intron
ENST00000475650 (TBC1D10B-003) 30357102-30359674 retained_intron
ENST00000475872 (TBC1D10B-005) 30358776-30360176 retained_intron
ENST00000478158 (TBC1D10B-004) 30357107-30368007 retained_intron
ENST00000490703 (TBC1D10B-007) 30358094-30365212 protein_coding
ENST00000566671 (TBC1D10B-008) 30359184-30360043 retained_intron
ENSG00000180209 (MYLPF)
myosin light chain, phosphorylatable, fast skeletal muscle 		ENST00000322861 (MYLPF-001) 30374777-30377991 protein_coding
ENST00000563718 (MYLPF-002) 30370934-30376698 protein_coding
ENST00000563728 (MYLPF-004) 30377563-30377991 retained_intron
ENST00000566955 (MYLPF-003) 30375820-30377904 protein_coding
ENST00000568749 (MYLPF-005) 30372318-30377702 protein_coding
ENSG00000260219 (RP11-347C12.10)
 ENST00000563252 (RP11-347C12.10-001) 30355441-30357104 lincRNA
CIL_0003V7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042492-ENSMUSG00000030672 CGP 10090 7:127197465-127214298
GeneTranscriptPositionBiotype
ENSMUSG00000030672 (Mylpf)
myosin light chain, phosphorylatable, fast skeletal muscle 		ENSMUST00000032910 (Mylpf-001) 127211608-127214298 protein_coding
ENSMUST00000127710 (Mylpf-002) 127212679-127213487 protein_coding
ENSMUST00000139613 (Mylpf-004) 127213896-127214287 processed_transcript
ENSMUST00000143222 (Mylpf-003) 127213114-127213455 processed_transcript
ENSMUSG00000042492 (Tbc1d10b)
TBC1 domain family, member 10b 		ENSMUST00000120705 (Tbc1d10b-001) 127197465-127208468 protein_coding
ENSMUST00000124240 (Tbc1d10b-002) 127199362-127207747 processed_transcript
ENSMUST00000133666 (Tbc1d10b-005) 127202953-127203474 retained_intron
ENSMUST00000137987 (Tbc1d10b-006) 127199822-127200954 retained_intron
ENSMUST00000138219 (Tbc1d10b-003) 127200253-127203694 retained_intron
ENSMUST00000147520 (Tbc1d10b-004) 127199867-127203653 retained_intron
ENSMUST00000153857 (Tbc1d10b-007) 127199057-127199985 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003V7_0001ENSDARG00000053254ENSDART00000075465ENSDART00000142582ENSDARG00000078604ENSDART00000114217CIL_0003V7_0002ENSG00000169221ENST00000409939ENST00000464644ENST00000475650ENST00000475872ENST00000478158ENST00000490703ENST00000566671ENSG00000180209ENST00000322861ENST00000563718ENST00000563728ENST00000566955ENST00000568749ENSG00000260219ENST00000563252CIL_0003V7_0003ENSMUSG00000030672ENSMUST00000032910ENSMUST00000127710ENSMUST00000139613ENSMUST00000143222ENSMUSG00000042492ENSMUST00000120705ENSMUST00000124240ENSMUST00000133666ENSMUST00000137987ENSMUST00000138219ENSMUST00000147520ENSMUST00000153857
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003V7_0001ENSDARG00000053254ENSDART00000075465ENSDART00000142582ENSDARG00000078604ENSDART00000114217CIL_0003V7_0002ENSG00000169221ENST00000409939ENST00000475650ENST00000478158ENSG00000180209ENST00000322861ENST00000563718ENST00000563728ENST00000566955ENST00000568749ENSG00000260219ENST00000563252CIL_0003V7_0003ENSMUSG00000030672ENSMUST00000032910ENSMUST00000127710ENSMUST00000139613ENSMUST00000143222ENSMUSG00000042492ENSMUST00000120705ENSMUST00000124240
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053254 ENSDART00000075465 N/A N/A N/A 11.118±0.67 N/A N/A 3.786±0.07 194.735±191.18 2.951±0.00 N/A 10215.200±0.00 N/A N/A N/A
ENSDART00000142582 N/A N/A N/A 2.449±0.77 N/A N/A 3.792±0.00 0.661±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000078604 ENSDART00000114217 N/A N/A N/A 19.945±7.44 N/A N/A 4.179±1.92 6.009±2.19 0.448±0.00 N/A 1.851±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169221 ENST00000409939 17.207±0.00 13.103±0.00 0.650±0.00 6.715±6.00 11.662±0.00 6.367±5.71 3.387±3.31 11.235±0.00 1.960±0.53 19.087±0.00 10.653±10.38 19.442±15.34 17.628±4.21 29.952±0.42
ENST00000464644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475650 N/A 4.645±0.00 N/A N/A 0.507±0.00 0.714±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478158 N/A 2.254±0.00 N/A 0.208±0.00 N/A N/A N/A 0.127±0.00 N/A 0.513±0.00 N/A 0.977±0.00 N/A N/A
ENST00000490703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180209 ENST00000322861 N/A N/A N/A 0.062±0.00 89.625±89.05 N/A N/A N/A 1.317±0.00 N/A 591.159±156.32 0.534±0.00 2.097±0.32 6.281±0.00
ENST00000563718 N/A N/A N/A 0.096±0.00 N/A 0.285±0.00 N/A N/A 0.076±0.00 0.178±0.00 N/A N/A N/A N/A
ENST00000563728 N/A 0.531±0.00 N/A 0.134±0.00 N/A N/A N/A 0.242±0.00 N/A 0.939±0.00 N/A 0.652±0.36 0.416±0.21 0.178±0.00
ENST00000566955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 0.098±0.00 N/A
ENST00000568749 N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00
ENSG00000260219 ENST00000563252 N/A N/A N/A N/A N/A 0.578±0.00 N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030672 ENSMUST00000032910 0.193±0.06 0.115±0.00 0.501±0.09 1.806±1.03 621.402±525.15 0.196±0.09 0.356±0.13 36.267±20.87 7.053±10.11 43.178±42.38 10449.339±631.32 0.755±0.41 1.029±0.27 0.319±0.11
ENSMUST00000127710 0.357±0.00 N/A N/A 1.406±0.00 N/A 0.936±0.29 0.362±0.13 N/A 0.419±0.27 N/A N/A 3.185±2.29 14.031±0.00 1.324±1.24
ENSMUST00000139613 0.282±0.10 0.419±0.00 N/A 4.864±0.00 0.996±0.00 N/A 0.750±0.00 1.133±0.00 0.674±0.05 0.678±0.00 N/A 2.645±2.13 5.893±0.41 3.148±2.57
ENSMUST00000143222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.164±0.00 N/A N/A
ENSMUSG00000042492 ENSMUST00000120705 10.245±1.66 13.514±1.16 7.502±1.88 10.327±5.26 13.604±4.01 14.840±2.54 3.340±0.96 8.210±0.97 6.752±5.02 11.884±2.00 6.004±2.25 13.127±4.01 29.924±15.03 1.254±0.45
ENSMUST00000124240 N/A N/A N/A 42.891±0.00 N/A N/A N/A N/A N/A N/A N/A 33.303±0.00 89.020±22.20 N/A
ENSMUST00000133666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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