C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180251 SLC9A4 9606 + 2:102473303-102533972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295269 SLC9A4-001 102473303-102533972 protein_coding
  ENST00000492154 SLC9A4-002 102503442-102505805 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295269ENST00000492154
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295269 0.053±0.00 0.126±0.00 0.794±0.00 0.229±0.12 0.247±0.14 0.107±0.07 0.579±0.38 2.121±1.76 0.277±0.25 0.209±0.08 0.228±0.21 0.214±0.15 0.144±0.09 0.555±0.35
ENST00000492154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004R2 CIL_0004R2_0001 CGP 2:102418689-102533972
CIL_0004QU CIL_0004QU_0001 CGP 2:102473303-102711318

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001696 IEA gastric acid secretion
GO:0002064 IEA epithelial cell development
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006812 IEA cation transport
GO:0006814 IEA sodium ion transport
GO:0006885 IEA regulation of pH
GO:0015299 IEA solute:proton antiporter activity
GO:0015385 IEA sodium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058780 slc9a2 solute carrier family 9 (sodium/hydrogen exchanger), member 2 protein_coding Danio_rerio
ENSMUSG00000026065 Slc9a4 solute carrier family 9 (sodium/hydrogen exchanger), member 4 protein_coding Mus_musculus

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