C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295269 SLC9A4-001 ENSG00000180251 9606 + 2:102473303-102533972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295269
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295269 0.053±0.00 0.126±0.00 0.794±0.00 0.229±0.12 0.247±0.14 0.107±0.07 0.579±0.38 2.121±1.76 0.277±0.25 0.209±0.08 0.228±0.21 0.214±0.15 0.144±0.09 0.555±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004R2 CIL_0004R2_0001 CGP 2:102418689-102533972
CIL_0004QU CIL_0004QU_0001 CGP 2:102473303-102711318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001696 IEA gastric acid secretion
GO:0002064 IEA epithelial cell development
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006812 IEA cation transport
GO:0006814 IEA sodium ion transport
GO:0006885 IEA regulation of pH
GO:0015299 IEA solute:proton antiporter activity
GO:0015385 IEA sodium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027233 Slc9a4-201 protein_coding Mus_musculus 0 2161
ENSMUST00000027231 Slc9a2-201 protein_coding Mus_musculus 0 536

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