C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2ac
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180573 HIST1H2AC 9606 + 6:26124145-26139116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314088 HIST1H2AC-001 26124145-26139116 nonsense_mediated_decay
  ENST00000377791 HIST1H2AC-201 26124145-26139102 protein_coding
  ENST00000602637 HIST1H2AC-002 26124203-26139084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314088ENST00000377791ENST00000602637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314088 N/A N/A N/A 1.419±0.00 1.856±0.00 6.255±0.00 N/A N/A 4.722±0.00 5.902±0.00 N/A 1.245±0.00 2.153±0.00 N/A
ENST00000377791 0.572±0.00 2.343±0.00 9.767±0.00 7.472±5.78 1.952±0.93 10.367±0.00 5.060±1.79 6.097±1.26 6.113±0.00 5.260±0.00 2.674±0.86 5.987±1.54 4.573±2.17 2.416±1.09
ENST00000602637 1.204±0.00 2.730±0.00 N/A 2.961±0.00 7.246±0.00 4.967±0.00 2.113±0.89 6.737±0.00 N/A 7.838±0.00 0.904±0.23 1.747±1.31 3.006±1.12 1.176±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UC CIL_0000UC_0004 CGP 6:26114873-26139116
CIL_0001C2 CIL_0001C2_0006 CGP 6:26124145-26157050

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0008150 ND biological_process
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068995 zgc:101846 zgc:101846 protein_coding Danio_rerio
ENSDARG00000070286 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000074260 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000075220 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000075379 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000076507 protein_coding Danio_rerio
ENSDARG00000086552 protein_coding Danio_rerio
ENSDARG00000086604 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000087451 protein_coding Danio_rerio
ENSDARG00000088291 protein_coding Danio_rerio
ENSDARG00000088686 protein_coding Danio_rerio
ENSDARG00000091205 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio

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