C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate (chondroitin 4) sulfotransferase 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180767 CHST13 9606 + 3:126524283-126543291 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319340 CHST13-001 126524283-126543291 protein_coding
  ENST00000615522 CHST13-201 126524333-126542879 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000319340ENST00000615522
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000319340 0.313±0.00 0.717±0.00 0.170±0.00 0.144±0.11 0.423±0.00 N/A 0.138±0.00 2.617±1.01 13.112±0.00 N/A 1.871±1.76 0.321±0.26 13.579±2.10
ENST00000615522 N/A N/A 0.880±0.00 N/A N/A 0.096±0.01 0.133±0.00 0.812±0.00 N/A 0.053±0.00 0.629±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001537 IDA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0005975 TAS carbohydrate metabolic process
GO:0008146 IEA sulfotransferase activity
GO:0016021 NAS:IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IDA chondroitin sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0047756 IDA chondroitin 4-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004018 CHST13 carbohydrate (chondroitin 4) sulfotransferase 13 protein_coding Danio_rerio
ENSMUSG00000056643 Chst13 carbohydrate (chondroitin 4) sulfotransferase 13 protein_coding Mus_musculus

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