C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (chondroitin 4) sulfotransferase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319340 CHST13-001 ENSG00000180767 9606 + 3:126524283-126543291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENST00000319340
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000319340 0.313±0.00 0.717±0.00 0.170±0.00 0.144±0.11 0.423±0.00 0.138±0.00 2.617±1.01 13.112±0.00 1.871±1.76 0.321±0.26 13.579±2.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001537 IDA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0005975 TAS carbohydrate metabolic process
GO:0008146 IEA sulfotransferase activity
GO:0016021 NAS:IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IDA chondroitin sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0047756 IDA chondroitin 4-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070890 Chst13-201 protein_coding Mus_musculus 0 732
ENSMUST00000043050 Chst12-001 protein_coding Mus_musculus 2e-16 92

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