C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein particle complex 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181029 TRAPPC5 9606 + 19:7680843-7687703 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317378 TRAPPC5-002 7680875-7682856 protein_coding
  ENST00000426877 TRAPPC5-003 7680879-7682858 protein_coding
  ENST00000595985 TRAPPC5-004 7682243-7682854 protein_coding
  ENST00000596148 TRAPPC5-001 7680843-7687703 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317378ENST00000426877ENST00000595985ENST00000596148
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317378 N/A N/A N/A 4.911±0.00 N/A N/A 10.641±0.00 N/A N/A N/A N/A N/A 12.151±0.00 38.333±0.00
ENST00000426877 43.934±0.00 46.641±0.00 4.345±0.00 24.526±13.63 47.379±39.05 27.398±20.98 16.572±12.84 40.081±35.32 25.385±23.35 54.542±0.00 24.439±2.08 21.372±20.08 32.393±21.28 67.902±0.00
ENST00000595985 45.067±0.00 90.567±0.00 1.558±0.00 26.903±15.75 42.493±0.00 19.323±8.27 17.319±0.00 28.187±18.12 16.998±11.40 N/A 11.969±1.32 56.631±39.15 64.002±36.43 67.602±45.03
ENST00000596148 N/A 0.870±0.00 N/A 0.506±0.26 0.152±0.00 0.438±0.30 0.131±0.00 0.363±0.22 0.102±0.00 0.163±0.00 N/A 0.259±0.16 N/A 0.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AR CIL_0005AR_0001 CGP 19:7680843-7702146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0016192 IEA vesicle-mediated transport
GO:0030008 IEA TRAPP complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026068 trappc5 trafficking protein particle complex 5 protein_coding Danio_rerio
ENSMUSG00000040236 Trappc5 trafficking protein particle complex 5 protein_coding Mus_musculus

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