C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mucin 16, cell surface associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181143 MUC16 9606 - 19:8848844-8981342 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000397910 MUC16-001 8848844-8981342 protein_coding
  ENST00000596768 MUC16-003 8848845-8891997 nonsense_mediated_decay
  ENST00000596956 MUC16-005 8863316-8867014 processed_transcript
  ENST00000599436 MUC16-004 8848845-8896090 protein_coding
  ENST00000601404 MUC16-002 8848845-8896090 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000397910ENST00000596768ENST00000596956ENST00000599436ENST00000601404
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000397910 N/A 0.001±0.00 0.001±0.00 0.039±0.00 N/A 0.038±0.00 N/A 0.136±0.00 0.126±0.12 0.085±0.07 0.107±0.06
ENST00000596768 0.071±0.00 0.027±0.00 N/A 0.377±0.00 0.035±0.00 N/A 0.007±0.00 1.993±0.00 0.115±0.07 0.891±0.23 1.003±0.00
ENST00000596956 0.534±0.00 0.224±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599436 0.182±0.00 N/A 0.006±0.00 0.390±0.00 N/A N/A N/A 1.057±0.00 0.110±0.00 1.214±0.24 N/A
ENST00000601404 N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.806±0.00 N/A 0.631±0.52 0.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KA CIL_0005KA_0001 CGP 19:8832398-8981342
CIL_000341 CIL_000341_0001 CGP 19:8848844-9094213

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0009897 IEA external side of plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000032134 Muc16 mucin 16 protein_coding Mus_musculus

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