C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005KA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170948-ENSG00000181143 CGP 9606 19:8832398-8981342
GeneTranscriptPositionBiotype
ENSG00000181143 (MUC16)
mucin 16, cell surface associated 		ENST00000397910 (MUC16-001) 8848844-8981342 protein_coding
ENST00000596768 (MUC16-003) 8848845-8891997 nonsense_mediated_decay
ENST00000596956 (MUC16-005) 8863316-8867014 processed_transcript
ENST00000599436 (MUC16-004) 8848845-8896090 protein_coding
ENST00000601404 (MUC16-002) 8848845-8896090 nonsense_mediated_decay
ENSG00000269400 (CTD-2529P6.4)
 ENST00000595277 (CTD-2529P6.4-001) 8833065-8833541 sense_intronic
CIL_0005KA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038691-ENSMUSG00000032134 CGP 10090 9:18478379-18512885
GeneTranscriptPositionBiotype
ENSMUSG00000032134 (Muc16)
mucin 16 		ENSMUST00000034653 (Muc16-201) 18495455-18512885 protein_coding
ENSMUSG00000038691 (Mbd3l1)
methyl-CpG binding domain protein 3-like 1 		ENSMUST00000069218 (Mbd3l1-201) 18478379-18485292 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_0005KA_0001ENSG00000181143ENST00000397910ENST00000596768ENST00000596956ENST00000599436ENST00000601404ENSG00000269400ENST00000595277CIL_0005KA_0002ENSMUSG00000032134ENSMUST00000034653ENSMUSG00000038691ENSMUST00000069218
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_0005KA_0001ENSG00000181143ENST00000397910ENST00000596768ENST00000596956ENST00000599436ENST00000601404ENSG00000269400ENST00000595277CIL_0005KA_0002ENSMUSG00000032134ENSMUST00000034653ENSMUSG00000038691ENSMUST00000069218
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSG00000181143 ENST00000397910 N/A 0.001±0.00 N/A 0.001±0.00 0.039±0.00 N/A 0.038±0.00 N/A N/A 0.136±0.00 0.126±0.12 0.085±0.07 0.107±0.06
ENST00000596768 0.071±0.00 0.027±0.00 N/A N/A 0.377±0.00 0.035±0.00 N/A 0.007±0.00 N/A 1.993±0.00 0.115±0.07 0.891±0.23 1.003±0.00
ENST00000596956 0.534±0.00 0.224±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599436 0.182±0.00 N/A N/A 0.006±0.00 0.390±0.00 N/A N/A N/A N/A 1.057±0.00 0.110±0.00 1.214±0.24 N/A
ENST00000601404 N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A 0.806±0.00 N/A 0.631±0.52 0.712±0.00
ENSG00000269400 ENST00000595277 N/A 0.049±0.00 N/A 0.026±0.00 N/A N/A 0.024±0.00 0.241±0.00 N/A N/A 0.140±0.00 N/A 0.331±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUSG00000032134 ENSMUST00000034653 0.736±0.00 0.084±0.01 0.360±0.00 N/A 1.001±0.14 0.153±0.08 N/A 0.040±0.02 0.137±0.07 0.950±0.00 1.316±0.21 0.155±0.15 0.756±0.00
ENSMUSG00000038691 ENSMUST00000069218 N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 0.019±0.01 N/A 0.036±0.01 0.006±0.00 62.722±12.90

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