C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 3, H2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181218 HIST3H2A 9606 - 1:228456979-228457873 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366695 HIST3H2A-001 228456979-228457873 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366695 0.421±0.00 0.865±0.00 0.589±0.00 7.847±2.33 3.587±2.00 4.542±0.12 5.784±2.07 0.874±0.69 1.028±0.89 3.666±1.73 0.487±0.00 5.846±2.53 3.127±1.47 2.689±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0002 CGP 1:228456979-228460470

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0000788 IDA nuclear nucleosome
GO:0003677 IDA:IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006337 IMP nucleosome disassembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070914 IMP UV-damage excision repair

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068995 zgc:101846 zgc:101846 protein_coding Danio_rerio
ENSDARG00000070286 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000074260 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000075220 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000075379 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000076507 protein_coding Danio_rerio
ENSDARG00000086552 protein_coding Danio_rerio
ENSDARG00000086604 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSDARG00000087451 protein_coding Danio_rerio
ENSDARG00000088291 protein_coding Danio_rerio
ENSDARG00000088686 protein_coding Danio_rerio
ENSDARG00000091205 si:ch211-113a14.19 si:ch211-113a14.19 protein_coding Danio_rerio
ENSMUSG00000078851 Hist3h2a histone cluster 3, H2a protein_coding Mus_musculus

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