C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 135
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181481 RNF135 9606 + 17:30968785-30999911 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324689 RNF135-003 30971023-30999909 protein_coding
  ENST00000328381 RNF135-001 30970201-30999911 protein_coding
  ENST00000434242 RNF135-002 30988077-30997528 protein_coding
  ENST00000443677 RNF135-004 30970984-30999370 protein_coding
  ENST00000535306 RNF135-007 30971060-30999911 protein_coding
  ENST00000580444 RNF135-009 30971141-30997248 protein_coding
  ENST00000582674 RNF135-008 30968785-30970307 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324689ENST00000328381ENST00000443677ENST00000535306ENST00000582674
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324689 7.129±0.00 6.017±0.00 N/A 0.709±0.00 9.971±0.00 2.782±0.00 2.521±0.00 6.693±0.00 1.506±0.00 3.779±0.00 1.680±0.00 3.096±1.45 8.472±2.37 4.294±0.00
ENST00000328381 1.493±0.00 1.474±0.00 0.370±0.00 N/A 1.656±1.11 0.382±0.24 0.251±0.03 1.490±0.51 0.609±0.00 1.386±0.00 N/A 1.961±1.26 N/A 0.912±0.54
ENST00000443677 4.364±0.00 N/A N/A N/A 1.224±0.00 N/A N/A N/A N/A 0.834±0.00 0.929±0.42 N/A N/A N/A
ENST00000535306 N/A 1.561±0.00 N/A 0.409±0.00 0.636±0.00 0.702±0.00 N/A 5.213±0.00 N/A 2.628±0.00 0.733±0.00 2.188±0.37 8.653±0.00 1.250±0.05
ENST00000582674 N/A N/A N/A N/A N/A 1.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073Y CIL_00073Y_0001 CGP 17:30906344-30999911

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0032480 TAS negative regulation of type I interferon production
GO:0032728 IMP positive regulation of interferon-beta production
GO:0043021 IPI ribonucleoprotein complex binding
GO:0045087 TAS innate immune response
GO:0045088 IMP regulation of innate immune response
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091057 AL954746.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000020707 Rnf135 ring finger protein 135 protein_coding Mus_musculus

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