C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 135
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020707 Rnf135 10090 + 11:80183851-80199757 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017839 Rnf135-001 80183851-80199757 protein_coding
  ENSMUST00000134909 Rnf135-002 80184223-80190011 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017839
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017839 4.460±0.72 6.700±2.97 4.179±0.01 0.595±0.08 4.660±1.49 3.476±1.06 2.007±0.32 2.932±0.91 3.981±1.81 3.555±0.61 0.719±0.21 5.214±3.14 4.012±0.58 1.482±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073Y CIL_00073Y_0002 CGP 11:80154105-80199757

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0032728 ISS positive regulation of interferon-beta production
GO:0043021 IEA ribonucleoprotein complex binding
GO:0045087 IEA innate immune response
GO:0045088 ISS regulation of innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091057 AL954746.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000181481 RNF135 ring finger protein 135 protein_coding Homo_sapiens

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