C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: increased sodium tolerance 1 homolog (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182149 IST1 9606 + 16:71845996-71931199 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329908 IST1-002 71895543-71929010 protein_coding
  ENST00000378798 IST1-010 71895553-71929008 protein_coding
  ENST00000378799 IST1-001 71895249-71931199 protein_coding
  ENST00000424485 IST1-019 71895508-71920817 protein_coding
  ENST00000439924 IST1-011 71915626-71929002 nonsense_mediated_decay
  ENST00000456820 IST1-012 71916560-71928974 protein_coding
  ENST00000534994 IST1-016 71895553-71922540 protein_coding
  ENST00000535424 IST1-201 71894719-71930639 protein_coding
  ENST00000536027 IST1-025 71922627-71928049 nonsense_mediated_decay
  ENST00000537571 IST1-022 71920760-71923509 retained_intron
  ENST00000537613 IST1-018 71895494-71922680 protein_coding
  ENST00000538104 IST1-014 71894405-71916493 protein_coding
  ENST00000538565 IST1-008 71895531-71928339 processed_transcript
  ENST00000538709 IST1-024 71921424-71922934 retained_intron
  ENST00000538850 IST1-009 71895548-71928152 protein_coding
  ENST00000539186 IST1-017 71895589-71921400 protein_coding
  ENST00000540296 IST1-013 71885233-71916552 protein_coding
  ENST00000541180 IST1-006 71924408-71927838 retained_intron
  ENST00000541571 IST1-004 71893934-71927973 protein_coding
  ENST00000541918 IST1-015 71895551-71922681 protein_coding
  ENST00000544564 IST1-003 71890569-71927890 protein_coding
  ENST00000545388 IST1-023 71921104-71922753 retained_intron
  ENST00000545518 IST1-021 71916525-71921762 retained_intron
  ENST00000566536 IST1-020 71895510-71920898 retained_intron
  ENST00000568581 IST1-026 71845996-71917094 protein_coding
  ENST00000606369 IST1-202 71895493-71930639 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329908ENST00000378798ENST00000439924ENST00000456820ENST00000534994ENST00000538565ENST00000539186ENST00000566536
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329908 N/A N/A 10.677±1.27 N/A 9.357±0.00 3.663±0.00 N/A N/A N/A N/A 15.571±5.47 19.564±6.71 37.966±0.00
ENST00000378798 N/A 11.569±0.00 N/A N/A 10.274±0.00 N/A 15.021±0.00 N/A 6.595±0.00 N/A 14.371±0.00 17.899±0.00 N/A
ENST00000439924 16.613±0.00 13.207±0.00 N/A 15.009±4.39 11.765±0.00 N/A 9.114±3.71 4.778±0.00 N/A 4.840±0.00 22.760±2.72 20.909±0.00 24.539±0.00
ENST00000456820 22.653±0.00 16.595±0.00 18.122±0.00 23.016±0.00 14.861±0.00 N/A 25.347±0.00 6.521±0.00 20.951±0.00 13.859±0.00 12.745±0.00 19.190±0.00 28.160±0.00
ENST00000534994 N/A N/A N/A N/A N/A N/A N/A N/A 27.035±0.00 14.123±0.00 N/A N/A N/A
ENST00000538565 N/A N/A N/A N/A 17.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539186 N/A N/A N/A N/A N/A N/A 18.766±0.00 N/A N/A N/A 37.262±0.00 N/A N/A
ENST00000566536 N/A N/A 33.432±0.00 31.227±0.00 N/A 14.201±0.00 N/A N/A 30.219±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000564 CIL_000564_0001 CGP 16:71845996-71931199

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 IMP cytokinesis
GO:0005515 IPI protein binding
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005813 IDA centrosome
GO:0005829 IDA cytosol
GO:0008104 IMP protein localization
GO:0009838 IDA abscission
GO:0019076 IDA viral release from host cell
GO:0019904 IPI protein domain specific binding
GO:0030496 IDA midbody
GO:0031410 IEA cytoplasmic vesicle
GO:0032403 IDA protein complex binding
GO:0045184 IMP establishment of protein localization
GO:0045862 IDA positive regulation of proteolysis
GO:0046745 IDA viral capsid secondary envelopment
GO:0048672 IEA positive regulation of collateral sprouting
GO:0051301 IMP cell division
GO:0070062 IDA extracellular vesicular exosome
GO:0090541 IPI MIT domain binding
GO:0090543 IDA Flemming body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051888 ist1 increased sodium tolerance 1 homolog (yeast) protein_coding Danio_rerio
ENSMUSG00000031729 Ist1 increased sodium tolerance 1 homolog (yeast) protein_coding Mus_musculus

Loading