C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000564_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182149-ENSG00000182149 CGP 9606 16:71845996-71931199
GeneTranscriptPositionBiotype
ENSG00000182149 (IST1)
increased sodium tolerance 1 homolog (yeast) 		ENST00000329908 (IST1-002) 71895543-71929010 protein_coding
ENST00000378798 (IST1-010) 71895553-71929008 protein_coding
ENST00000378799 (IST1-001) 71895249-71931199 protein_coding
ENST00000424485 (IST1-019) 71895508-71920817 protein_coding
ENST00000439924 (IST1-011) 71915626-71929002 nonsense_mediated_decay
ENST00000456820 (IST1-012) 71916560-71928974 protein_coding
ENST00000534994 (IST1-016) 71895553-71922540 protein_coding
ENST00000535424 (IST1-201) 71894719-71930639 protein_coding
ENST00000536027 (IST1-025) 71922627-71928049 nonsense_mediated_decay
ENST00000537571 (IST1-022) 71920760-71923509 retained_intron
ENST00000537613 (IST1-018) 71895494-71922680 protein_coding
ENST00000538104 (IST1-014) 71894405-71916493 protein_coding
ENST00000538565 (IST1-008) 71895531-71928339 processed_transcript
ENST00000538709 (IST1-024) 71921424-71922934 retained_intron
ENST00000538850 (IST1-009) 71895548-71928152 protein_coding
ENST00000539186 (IST1-017) 71895589-71921400 protein_coding
ENST00000540296 (IST1-013) 71885233-71916552 protein_coding
ENST00000541180 (IST1-006) 71924408-71927838 retained_intron
ENST00000541571 (IST1-004) 71893934-71927973 protein_coding
ENST00000541918 (IST1-015) 71895551-71922681 protein_coding
ENST00000544564 (IST1-003) 71890569-71927890 protein_coding
ENST00000545388 (IST1-023) 71921104-71922753 retained_intron
ENST00000545518 (IST1-021) 71916525-71921762 retained_intron
ENST00000566536 (IST1-020) 71895510-71920898 retained_intron
ENST00000568581 (IST1-026) 71845996-71917094 protein_coding
ENST00000606369 (IST1-202) 71895493-71930639 protein_coding
ENSG00000224470 (ATXN1L)
ataxin 1-like 		ENST00000427980 (ATXN1L-001) 71845991-71857333 protein_coding
ENST00000565676 (ATXN1L-002) 71846069-71848418 retained_intron
ENST00000569119 (ATXN1L-003) 71846048-71885268 processed_transcript
ENSG00000261765 (RP11-498D10.3)
 ENST00000561979 (RP11-498D10.3-001) 71881553-71882273 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_000564_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031729-ENSMUSG00000031728 CGP 10090 8:109671322-109724932
GeneTranscriptPositionBiotype
ENSMUSG00000031728 (Zfp821)
zinc finger protein 821 		ENSMUST00000034163 (Zfp821-201) 109705549-109724932 protein_coding
ENSMUSG00000031729 (Ist1)
increased sodium tolerance 1 homolog (yeast) 		ENSMUST00000034164 (Ist1-201) 109671322-109693294 protein_coding
ENSMUSG00000048827 (Pkd1l3)
polycystic kidney disease 1 like 3 		ENSMUST00000057344 (Pkd1l3-201) 109614517-109670721 protein_coding
ENSMUST00000109242 (Pkd1l3-202) 109614517-109672592 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000564_0001ENSG00000182149ENST00000329908ENST00000378798ENST00000439924ENST00000456820ENST00000534994ENST00000538565ENST00000539186ENST00000566536ENSG00000224470ENST00000427980ENSG00000261765ENST00000561979CIL_000564_0002ENSMUSG00000031728ENSMUST00000034163ENSMUSG00000031729ENSMUST00000034164ENSMUSG00000048827ENSMUST00000057344ENSMUST00000109242
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182149 ENST00000329908 N/A N/A N/A 10.677±1.27 N/A 9.357±0.00 3.663±0.00 N/A N/A N/A N/A 15.571±5.47 19.564±6.71 37.966±0.00
ENST00000378798 N/A 11.569±0.00 N/A N/A N/A 10.274±0.00 N/A 15.021±0.00 N/A 6.595±0.00 N/A 14.371±0.00 17.899±0.00 N/A
ENST00000378799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439924 16.613±0.00 13.207±0.00 N/A N/A 15.009±4.39 11.765±0.00 N/A 9.114±3.71 4.778±0.00 N/A 4.840±0.00 22.760±2.72 20.909±0.00 24.539±0.00
ENST00000456820 22.653±0.00 16.595±0.00 N/A 18.122±0.00 23.016±0.00 14.861±0.00 N/A 25.347±0.00 6.521±0.00 20.951±0.00 13.859±0.00 12.745±0.00 19.190±0.00 28.160±0.00
ENST00000534994 N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.035±0.00 14.123±0.00 N/A N/A N/A
ENST00000535424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538565 N/A N/A N/A N/A N/A 17.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539186 N/A N/A N/A N/A N/A N/A N/A 18.766±0.00 N/A N/A N/A 37.262±0.00 N/A N/A
ENST00000540296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566536 N/A N/A N/A 33.432±0.00 31.227±0.00 N/A 14.201±0.00 N/A N/A 30.219±0.00 N/A N/A N/A N/A
ENST00000568581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224470 ENST00000427980 12.545±0.00 7.945±0.00 5.625±0.00 5.661±2.43 7.316±3.37 6.295±2.04 3.714±2.35 5.861±3.36 6.626±3.81 5.410±1.86 3.069±1.56 5.166±2.79 6.250±0.88 12.635±0.68
ENST00000565676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261765 ENST00000561979 0.675±0.00 1.603±0.00 N/A 0.746±0.00 1.254±0.00 0.326±0.00 0.779±0.00 1.405±0.00 0.270±0.00 0.632±0.00 0.068±0.00 0.869±0.75 N/A 0.293±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031728 ENSMUST00000034163 2.542±0.40 2.820±0.61 4.710±1.11 25.206±10.38 1.747±0.90 3.756±1.50 0.791±0.13 2.360±0.77 1.403±1.47 2.044±0.18 1.147±0.30 5.186±1.70 3.919±2.63 23.416±11.68
ENSMUSG00000031729 ENSMUST00000034164 27.053±2.43 19.852±1.08 28.107±2.80 33.657±9.46 25.298±7.35 31.228±7.96 11.234±1.11 27.300±1.06 14.183±1.52 25.413±1.24 10.672±2.09 28.785±8.06 44.701±8.56 14.488±3.56
ENSMUSG00000048827 ENSMUST00000057344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.054±1.41
ENSMUST00000109242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.008±0.62

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