C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 1, sigma 2 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182287 AP1S2 9606 - X:15825806-15855014 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329235 AP1S2-001 15825806-15854931 protein_coding
  ENST00000380291 AP1S2-003 15830059-15854804 protein_coding
  ENST00000450644 AP1S2-004 15831443-15852502 protein_coding
  ENST00000452376 AP1S2-002 15826892-15852513 protein_coding
  ENST00000479184 AP1S2-005 15831106-15845516 processed_transcript
  ENST00000545766 AP1S2-201 15827325-15855014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000329235ENST00000380291ENST00000450644ENST00000452376ENST00000545766
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000329235 15.589±0.00 11.150±0.00 2.425±0.00 4.301±0.54 8.089±2.20 14.172±11.98 5.587±1.76 3.350±2.16 1.811±1.34 5.466±2.42 3.334±2.21 7.825±2.45 8.062±5.39
ENST00000380291 N/A 1.261±0.00 0.539±0.00 1.938±0.00 1.525±0.00 N/A N/A 0.498±0.00 0.679±0.00 0.581±0.00 0.730±0.18 N/A 3.912±1.17
ENST00000450644 N/A N/A N/A N/A N/A 4.153±0.00 N/A N/A N/A 7.257±0.00 4.933±0.00 N/A 9.152±0.00
ENST00000452376 N/A N/A N/A N/A N/A N/A 5.576±0.00 2.164±0.00 N/A N/A N/A 3.607±0.00 N/A
ENST00000545766 N/A N/A N/A 12.021±1.60 8.154±0.00 N/A 7.273±0.00 2.977±0.00 10.014±0.00 N/A 6.413±0.00 14.880±0.00 7.617±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0005905 IEA coated pit
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030117 IEA membrane coat
GO:0030119 TAS AP-type membrane coat adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032588 TAS trans-Golgi network membrane
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058504 ap1s2 adaptor-related protein complex 1, sigma 2 subunit protein_coding Danio_rerio
ENSMUSG00000031367 Ap1s2 adaptor-related protein complex 1, sigma 2 subunit protein_coding Mus_musculus

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