C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, sigma 2 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329235 AP1S2-001 ENSG00000182287 9606 - X:15825806-15854931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000329235
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000329235 15.589±0.00 11.150±0.00 2.425±0.00 4.301±0.54 8.089±2.20 14.172±11.98 5.587±1.76 3.350±2.16 1.811±1.34 5.466±2.42 3.334±2.21 7.825±2.45 8.062±5.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0005905 IEA coated pit
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030119 TAS AP-type membrane coat adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032588 TAS trans-Golgi network membrane
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069041 Ap1s2-001 protein_coding Mus_musculus 0 1140
ENSMUST00000033734 Ap1s2-002 protein_coding Mus_musculus 0 1088
ENSMUST00000112294 Ap1s2-003 protein_coding Mus_musculus 0 737
ENSMUST00000140845 Ap1s2-004 protein_coding Mus_musculus 0 538

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