C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 11 open reading frame 54
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182919 C11orf54 9606 + 11:93741591-93764749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331239 C11orf54-002 93741642-93763083 protein_coding
  ENST00000354421 C11orf54-003 93741669-93762316 protein_coding
  ENST00000526335 C11orf54-012 93746485-93755326 protein_coding
  ENST00000527003 C11orf54-008 93741683-93753757 protein_coding
  ENST00000527363 C11orf54-011 93745829-93755393 protein_coding
  ENST00000528099 C11orf54-004 93741659-93762303 protein_coding
  ENST00000528288 C11orf54-001 93741591-93764749 protein_coding
  ENST00000530279 C11orf54-014 93741688-93753994 protein_coding
  ENST00000530620 C11orf54-015 93741670-93759859 protein_coding
  ENST00000531516 C11orf54-010 93741596-93742753 processed_transcript
  ENST00000531650 C11orf54-006 93741686-93759816 protein_coding
  ENST00000533154 C11orf54-013 93754873-93761636 protein_coding
  ENST00000533585 C11orf54-009 93741657-93754008 protein_coding
  ENST00000540113 C11orf54-201 93741594-93763102 protein_coding
  ENST00000617482 C11orf54-202 93741594-93763102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLiverLungMusclePlacentaTestisENST00000331239ENST00000354421ENST00000528288ENST00000540113ENST00000617482
Transcript ID Adipose Bladder Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000331239 N/A N/A N/A 16.858±0.00 21.750±7.19 10.333±0.00 9.805±0.00 5.958±0.00 6.060±0.19 N/A
ENST00000354421 N/A 37.909±0.00 N/A 10.315±0.00 33.558±0.00 N/A N/A 8.847±0.00 N/A N/A
ENST00000528288 6.056±0.00 10.012±0.00 N/A N/A 11.013±0.47 N/A N/A 3.450±0.00 N/A N/A
ENST00000540113 N/A N/A 10.362±0.00 N/A 25.715±0.00 N/A N/A N/A N/A 10.398±0.00
ENST00000617482 N/A N/A N/A N/A N/A 6.952±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0008152 IEA metabolic process
GO:0008270 IDA zinc ion binding
GO:0016788 IDA hydrolase activity, acting on ester bonds
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016655 C24H11orf54 chromosome 11 open reading frame 54 protein_coding Danio_rerio
ENSMUSG00000031938 4931406C07Rik RIKEN cDNA 4931406C07 gene protein_coding Mus_musculus

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