C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 11 open reading frame 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528288 C11orf54-001 ENSG00000182919 9606 + 11:93741591-93764749 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderKidneyMuscleENST00000528288
Transcript ID Adipose Bladder Kidney Muscle
ENST00000528288 6.056±0.00 10.012±0.00 11.013±0.47 3.450±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0008152 IEA metabolic process
GO:0008270 IDA zinc ion binding
GO:0016788 IDA hydrolase activity, acting on ester bonds
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034414 4931406C07Rik-201 protein_coding Mus_musculus 0 604
ENSMUST00000178977 4931406C07Rik-202 protein_coding Mus_musculus 0 604
ENSMUST00000180339 4931406C07Rik-203 protein_coding Mus_musculus 0 604
ENSMUST00000001172 Ankrd39-201 protein_coding Mus_musculus 0.0003 53
ENSMUST00000027414 Stk11ip-001 protein_coding Mus_musculus 0.00008 55
ENSMUST00000113553 Stk11ip-004 protein_coding Mus_musculus 0.00008 55
ENSMUST00000140963 Stk11ip-002 retained_intron Mus_musculus 0.00007 55
ENSMUST00000156838 Stk11ip-003 retained_intron Mus_musculus 0.00005 55

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