C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunoglobulin superfamily, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183067 IGSF5 9606 + 21:39745407-39802096 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380588 IGSF5-001 39745407-39802096 protein_coding
  ENST00000459922 IGSF5-003 39791630-39801435 retained_intron
  ENST00000479378 IGSF5-002 39751172-39788188 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000380588ENST00000459922ENST00000479378
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000380588 0.020±0.00 0.210±0.00 0.270±0.00 0.049±0.00 0.063±0.00 N/A N/A 0.005±0.00 0.091±0.08 N/A 0.263±0.22
ENST00000459922 0.070±0.00 N/A N/A 0.089±0.00 N/A 0.527±0.00 0.144±0.00 N/A N/A 0.557±0.00 0.263±0.06
ENST00000479378 N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A 0.787±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GD CIL_0003GD_0001 CGP 21:39556442-39802096
CIL_0001CU CIL_0001CU_0002 CGP 21:39745407-39929397

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0009986 IEA cell surface
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030165 IEA PDZ domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087983 igsf5 immunoglobulin superfamily, member 5 protein_coding Danio_rerio
ENSDARG00000090953 IGSF5 (2 of 2) immunoglobulin superfamily, member 5 protein_coding Danio_rerio
ENSMUSG00000000159 Igsf5 immunoglobulin superfamily, member 5 protein_coding Mus_musculus

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