C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003GD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183778-ENSG00000183067 CGP 9606 21:39556442-39802096
GeneTranscriptPositionBiotype
ENSG00000183067 (IGSF5)
immunoglobulin superfamily, member 5 		ENST00000380588 (IGSF5-001) 39745407-39802096 protein_coding
ENST00000459922 (IGSF5-003) 39791630-39801435 retained_intron
ENST00000479378 (IGSF5-002) 39751172-39788188 processed_transcript
ENSG00000184809 (C21orf88)
B3GALT5 antisense RNA 1 		ENST00000329618 (C21orf88-002) 39605599-39612821 antisense
ENST00000380604 (C21orf88-004) 39605599-39612441 antisense
ENST00000380612 (C21orf88-001) 39597147-39612441 antisense
ENST00000489821 (C21orf88-003) 39597147-39599656 antisense
ENSG00000225330 (AF064860.5)
 ENST00000416555 (AF064860.5-001) 39630271-39726085 sense_overlapping
ENSG00000231713 (AF064860.7)
 ENST00000419826 (AF064860.7-002) 39727846-39729684 lincRNA
ENST00000457325 (AF064860.7-001) 39727755-39730680 lincRNA
CIL_0003GD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074892-ENSMUSG00000000159 CGP 10090 16:96235801-96525580
GeneTranscriptPositionBiotype
ENSMUSG00000000157 (Itgb2l)
integrin beta 2-like 		ENSMUST00000000161 (Itgb2l-001) 96422288-96443619 protein_coding
ENSMUST00000113773 (Itgb2l-002) 96422376-96443612 protein_coding
ENSMUST00000131567 (Itgb2l-003) 96422292-96443614 nonsense_mediated_decay
ENSMUST00000131777 (Itgb2l-004) 96426730-96429144 processed_transcript
ENSMUSG00000000159 (Igsf5)
immunoglobulin superfamily, member 5 		ENSMUST00000000163 (Igsf5-002) 96361794-96404028 protein_coding
ENSMUST00000081093 (Igsf5-003) 96361794-96404031 protein_coding
ENSMUST00000113794 (Igsf5-001) 96361668-96422121 protein_coding
ENSMUST00000113795 (Igsf5-007) 96361794-96525580 protein_coding
ENSMUST00000136292 (Igsf5-005) 96396406-96421954 protein_coding
ENSMUST00000139595 (Igsf5-006) 96386331-96403328 processed_transcript
ENSMUSG00000074892 (B3galt5)
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 		ENSMUST00000099497 (B3galt5-002) 96280798-96319857 protein_coding
ENSMUST00000113800 (B3galt5-001) 96235801-96319859 protein_coding
ENSMUST00000134058 (B3galt5-004) 96273611-96313775 processed_transcript
ENSMUST00000153586 (B3galt5-003) 96273474-96313774 processed_transcript
ENSMUSG00000090223 (Pcp4)
Purkinje cell protein 4 		ENSMUST00000061739 (Pcp4-001) 96467606-96525793 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GD_0001ENSG00000183067ENST00000380588ENST00000459922ENST00000479378ENSG00000184809ENST00000329618ENST00000380604ENST00000380612ENST00000489821ENSG00000225330ENST00000416555ENSG00000231713ENST00000419826ENST00000457325CIL_0003GD_0002ENSMUSG00000000157ENSMUST00000000161ENSMUST00000113773ENSMUST00000131567ENSMUST00000131777ENSMUSG00000000159ENSMUST00000000163ENSMUST00000081093ENSMUST00000113794ENSMUST00000113795ENSMUST00000136292ENSMUST00000139595ENSMUSG00000074892ENSMUST00000099497ENSMUST00000113800ENSMUST00000134058ENSMUST00000153586ENSMUSG00000090223ENSMUST00000061739
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GD_0001ENSG00000183067ENST00000380588ENST00000459922ENST00000479378ENSG00000184809ENST00000329618ENST00000380604ENST00000380612ENST00000489821ENSG00000225330ENST00000416555ENSG00000231713ENST00000419826ENST00000457325CIL_0003GD_0002ENSMUSG00000000157ENSMUST00000000161ENSMUST00000113773ENSMUST00000131567ENSMUST00000131777ENSMUSG00000000159ENSMUST00000000163ENSMUST00000081093ENSMUST00000113794ENSMUST00000113795ENSMUST00000139595ENSMUSG00000074892ENSMUST00000099497ENSMUST00000113800ENSMUST00000134058ENSMUST00000153586ENSMUSG00000090223ENSMUST00000061739
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183067 ENST00000380588 N/A 0.020±0.00 0.210±0.00 0.270±0.00 0.049±0.00 0.063±0.00 N/A N/A 0.005±0.00 N/A N/A 0.091±0.08 N/A 0.263±0.22
ENST00000459922 N/A 0.070±0.00 N/A N/A 0.089±0.00 N/A 0.527±0.00 0.144±0.00 N/A N/A N/A N/A 0.557±0.00 0.263±0.06
ENST00000479378 N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A N/A 0.787±0.00 N/A
ENSG00000184809 ENST00000329618 N/A N/A N/A 0.357±0.24 0.338±0.04 0.886±0.00 N/A 0.060±0.00 N/A N/A N/A 0.119±0.05 0.086±0.04 0.083±0.00
ENST00000380604 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A 0.242±0.07 0.111±0.00 N/A
ENST00000380612 N/A 0.117±0.00 N/A 0.106±0.05 0.210±0.00 N/A 0.078±0.00 0.119±0.00 N/A N/A N/A 0.185±0.00 N/A 0.062±0.02
ENST00000489821 N/A N/A N/A 0.186±0.00 N/A 0.157±0.00 0.198±0.00 N/A 0.040±0.00 N/A N/A 0.127±0.00 0.109±0.00 0.059±0.00
ENSG00000225330 ENST00000416555 N/A N/A N/A 0.063±0.00 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231713 ENST00000419826 N/A N/A N/A N/A 0.303±0.00 N/A 0.409±0.00 N/A N/A N/A N/A N/A 0.663±0.00 N/A
ENST00000457325 N/A N/A N/A 0.038±0.00 0.055±0.00 N/A N/A N/A N/A N/A N/A 0.018±0.00 0.305±0.10 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000157 ENSMUST00000000161 N/A N/A N/A 0.016±0.00 N/A N/A 0.010±0.00 N/A 2.707±2.78 N/A N/A 0.074±0.02 0.012±0.00 N/A
ENSMUST00000113773 0.039±0.00 N/A 0.218±0.00 0.011±0.00 0.113±0.02 0.182±0.00 N/A N/A 1.073±1.51 0.046±0.00 N/A 0.053±0.01 0.024±0.00 0.017±0.00
ENSMUST00000131567 0.026±0.00 N/A 0.083±0.00 0.028±0.00 0.086±0.03 0.238±0.00 N/A N/A N/A 0.012±0.00 0.017±0.00 0.125±0.07 0.017±0.00 0.014±0.00
ENSMUST00000131777 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A 0.240±0.05 0.135±0.04 0.125±0.00
ENSMUSG00000000159 ENSMUST00000000163 2.254±0.00 N/A 15.187±2.84 N/A 0.305±0.07 4.955±0.00 N/A 6.921±1.17 N/A 8.884±0.94 N/A 1.693±0.60 0.400±0.00 0.604±0.23
ENSMUST00000081093 N/A N/A N/A N/A 0.257±0.12 17.266±1.79 0.111±0.00 11.850±1.93 6.591±4.64 2.246±0.00 N/A 0.841±0.35 1.929±2.15 0.133±0.09
ENSMUST00000113794 N/A 0.057±0.00 N/A N/A 0.226±0.07 2.428±0.00 0.054±0.00 4.210±0.71 0.753±0.12 2.432±0.41 0.035±0.00 0.429±0.00 0.264±0.24 0.134±0.00
ENSMUST00000113795 N/A N/A N/A N/A 0.255±0.08 6.055±2.34 0.136±0.00 N/A 3.557±2.00 N/A N/A 1.056±0.27 0.032±0.00 N/A
ENSMUST00000136292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.340±0.00
ENSMUSG00000074892 ENSMUST00000099497 0.031±0.02 N/A 0.081±0.01 2.014±2.12 0.078±0.05 44.498±10.53 0.007±0.00 2.997±1.73 0.036±0.00 N/A 0.010±0.00 1.765±0.47 1.100±1.02 N/A
ENSMUST00000113800 N/A 0.046±0.01 N/A 0.091±0.00 0.094±0.03 38.558±15.14 N/A 2.224±0.00 0.045±0.02 0.306±0.03 N/A 1.108±0.82 0.136±0.00 N/A
ENSMUST00000134058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00
ENSMUST00000153586 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090223 ENSMUST00000061739 29.320±28.61 0.411±0.07 295.609±84.43 121.522±115.79 0.405±0.08 N/A 0.715±0.46 N/A N/A N/A 0.221±0.11 6.725±9.62 6.439±9.23 1.463±0.97

Loading