C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 15 kDa selenoprotein isoform 1 precursor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183291 SEP15 9606 - 1:86862445-86914424 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331835 SEP15-001 86862445-86914365 protein_coding
  ENST00000370554 SEP15-002 86862725-86914134 protein_coding
  ENST00000401030 SEP15-005 86863301-86914126 protein_coding
  ENST00000467557 SEP15-004 86868096-86914065 processed_transcript
  ENST00000469566 SEP15-003 86863167-86914424 processed_transcript
  ENST00000497861 SEP15-006 86863517-86903352 processed_transcript
  ENST00000611507 SEP15-201 86862447-86914424 protein_coding
  ENST00000616787 SEP15-202 86862447-86914424 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331835ENST00000370554ENST00000401030ENST00000469566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331835 4.252±0.00 N/A 1.276±0.00 6.613±0.00 4.275±0.52 N/A 0.395±0.00 1.322±0.00 2.091±0.00 5.050±0.00 N/A 18.827±17.30 6.842±0.00 N/A
ENST00000370554 30.500±0.00 53.322±0.00 4.733±0.00 18.797±9.48 24.418±15.99 27.347±15.36 5.996±3.81 30.302±19.24 15.345±10.37 23.002±8.28 6.051±2.15 15.723±7.83 26.203±3.64 32.999±23.81
ENST00000401030 20.100±0.00 26.675±0.00 N/A 17.651±0.00 20.930±0.00 25.543±0.00 N/A N/A N/A N/A N/A 55.712±0.00 60.324±0.00 26.981±0.00
ENST00000469566 N/A N/A N/A 17.159±0.00 N/A N/A 0.633±0.00 N/A N/A N/A N/A N/A N/A 25.551±13.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008430 IEA selenium binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074940 sep15 selenoprotein 15 protein_coding Danio_rerio
ENSMUSG00000037072 Sep15 selenoprotein protein_coding Mus_musculus

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