C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen family A, 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183305 MAGEA2B 9606 + X:152714586-152718607 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331220 MAGEA2B-201 152714586-152718606 protein_coding
  ENST00000370293 MAGEA2B-001 152714601-152718607 protein_coding
  ENST00000409560 MAGEA2B-010 152714685-152717207 protein_coding
  ENST00000422085 MAGEA2B-008 152714642-152717466 protein_coding
  ENST00000423993 MAGEA2B-007 152714609-152717562 protein_coding
  ENST00000447530 MAGEA2B-003 152714628-152717373 protein_coding
  ENST00000453150 MAGEA2B-006 152714681-152717551 protein_coding
  ENST00000458057 MAGEA2B-004 152714630-152717217 protein_coding
  ENST00000467743 MAGEA2B-005 152714691-152717092 processed_transcript
  ENST00000492402 MAGEA2B-002 152714593-152717074 processed_transcript
  ENST00000497578 MAGEA2B-009 152714647-152716706 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000409560
Transcript ID Testis
ENST00000409560 0.175±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AT CIL_0001AT_0003 CGP X:152698752-152718607

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0016605 IDA PML body
GO:0031625 IDA ubiquitin protein ligase binding
GO:0033234 IDA negative regulation of protein sumoylation
GO:0042826 IDA histone deacetylase binding
GO:0044257 IMP cellular protein catabolic process
GO:0051443 IMP positive regulation of ubiquitin-protein transferase activity
GO:0070491 IDA repressing transcription factor binding
GO:0072331 IDA signal transduction by p53 class mediator
GO:0090398 IDA cellular senescence
GO:1901984 IDA negative regulation of protein acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSMUSG00000031118 1700080O16Rik RIKEN cDNA 1700080O16 gene protein_coding Mus_musculus
ENSMUSG00000031179 3830417A13Rik RIKEN cDNA 3830417A13 gene protein_coding Mus_musculus
ENSMUSG00000033343 Magea4 melanoma antigen, family A, 4 protein_coding Mus_musculus
ENSMUSG00000043453 Magea10 melanoma antigen family A, 10 protein_coding Mus_musculus
ENSMUSG00000055746 Magea2 melanoma antigen, family A, 2 protein_coding Mus_musculus
ENSMUSG00000063728 Magea6 melanoma antigen, family A, 6 protein_coding Mus_musculus
ENSMUSG00000079349 Magea5 melanoma antigen, family A, 5 protein_coding Mus_musculus
ENSMUSG00000079350 Magea8 melanoma antigen, family A, 8 protein_coding Mus_musculus
ENSMUSG00000094196 Magea3 melanoma antigen, family A, 3 protein_coding Mus_musculus
ENSMUSG00000096644 Magea1 melanoma antigen, family A, 1 protein_coding Mus_musculus

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