C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001AT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123584-ENSG00000156009 CGP 9606 X:149781930-149885835
GeneTranscriptPositionBiotype
ENSG00000123584 (MAGEA9B)
melanoma antigen family A, 9B 		ENST00000243314 (MAGEA9B-001) 149781930-149787737 protein_coding
ENSG00000156009 (MAGEA8)
melanoma antigen family A, 8 		ENST00000286482 (MAGEA8-001) 149881195-149885834 protein_coding
ENST00000345830 (MAGEA8-003) 149881220-149884564 processed_transcript
ENST00000493910 (MAGEA8-002) 149881221-149884554 processed_transcript
ENST00000535454 (MAGEA8-201) 149881141-149885835 protein_coding
ENST00000542674 (MAGEA8-202) 149881141-149885835 protein_coding
ENSG00000224732 (MAGEA7P)
melanoma antigen family A, 7, pseudogene 		ENST00000436482 (MAGEA7P-001) 149808214-149809155 unprocessed_pseudogene
ENSG00000230899 (MAGEA8-AS1)
MAGEA8 antisense RNA 1 (head to head) 		ENST00000427671 (MAGEA8-AS1-001) 149878836-149881070 antisense
CIL_0001AT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213401-ENSG00000268606 CGP 9606 X:152733779-152753884
GeneTranscriptPositionBiotype
ENSG00000213401 (MAGEA12)
melanoma antigen family A, 12 		ENST00000357916 (MAGEA12-001) 152733779-152737669 protein_coding
ENST00000393869 (MAGEA12-201) 152733779-152737660 protein_coding
ENST00000393900 (MAGEA12-202) 152733862-152737660 protein_coding
ENSG00000231447 (RP1-14D6.7)
 ENST00000437309 (RP1-14D6.7-001) 152746817-152747762 antisense
CIL_0001AT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000221867-ENSG00000183305 CGP 9606 X:152698752-152718607
GeneTranscriptPositionBiotype
ENSG00000221867 (MAGEA3)
melanoma antigen family A, 3 		ENST00000370278 (MAGEA3-001) 152698752-152702347 protein_coding
ENST00000417212 (MAGEA3-002) 152698767-152701427 protein_coding
ENST00000598245 (MAGEA3-201) 152698767-152702336 protein_coding
ENSG00000268902 (CSAG2)
CSAG family, member 2 		ENST00000535353 (CSAG2-002) 152708571-152709007 transcribed_unprocessed_pseudogene
ENST00000598036 (CSAG2-003) 152708261-152714549 processed_transcript
CIL_0001AT_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000268606-ENSG00000197172 CGP 9606 X:152749863-152769747
GeneTranscriptPositionBiotype
ENSG00000197172 (MAGEA6)
melanoma antigen family A, 6 		ENST00000329342 (MAGEA6-001) 152766136-152769747 protein_coding
ENST00000412733 (MAGEA6-002) 152767047-152769716 protein_coding
ENST00000457643 (MAGEA6-003) 152766944-152769677 protein_coding
ENST00000616035 (MAGEA6-201) 152766147-152769716 protein_coding
ENSG00000268916 (CH17-38B12.2)
CSAG family, member 3 		ENST00000599845 (CH17-38B12.2-001) 152759482-152760222 transcribed_processed_pseudogene
ENST00000617158 (CH17-38B12.2-002) 152753921-152760222 processed_transcript
CIL_0001AT_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055746-ENSMUSG00000055746 CGP 10090 X:155027201-155093666
GeneTranscriptPositionBiotype
ENSMUSG00000055746 (Magea2)
melanoma antigen, family A, 2 		ENSMUST00000069477 (Magea2-201) 155027201-155033292 protein_coding
ENSMUST00000112559 (Magea2-001) 155027484-155032500 protein_coding
ENSMUST00000178950 (Magea2-202) 155027487-155093666 protein_coding
ENSMUSG00000079349 (Magea5)
melanoma antigen, family A, 5 		ENSMUST00000069556 (Magea5-001) 155053345-155063145 protein_coding
ENSMUST00000169540 (Magea5-201) 155053061-155061553 protein_coding
ENSMUSG00000096644 (Magea1)
melanoma antigen, family A, 1 		ENSMUST00000078193 (Magea1-001) 155088686-155089793 protein_coding
CIL_0001AT_0006 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063728-ENSMUSG00000094196 CGP 10090 X:154924012-154949505
GeneTranscriptPositionBiotype
ENSMUSG00000063728 (Magea6)
melanoma antigen, family A, 6 		ENSMUST00000076986 (Magea6-201) 154924012-154926115 protein_coding
ENSMUST00000112562 (Magea6-001) 154924012-154935987 protein_coding
ENSMUSG00000094196 (Magea3)
melanoma antigen, family A, 3 		ENSMUST00000079867 (Magea3-001) 154948543-154949505 protein_coding
CIL_0001AT_0007 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079349-ENSMUSG00000096644 CGP 10090 X:155053061-155089793
GeneTranscriptPositionBiotype
ENSMUSG00000079349 (Magea5)
melanoma antigen, family A, 5 		ENSMUST00000069556 (Magea5-001) 155053345-155063145 protein_coding
ENSMUST00000169540 (Magea5-201) 155053061-155061553 protein_coding
ENSMUSG00000096644 (Magea1)
melanoma antigen, family A, 1 		ENSMUST00000078193 (Magea1-001) 155088686-155089793 protein_coding
CIL_0001AT_0008 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079350-ENSMUSG00000055746 CGP 10090 X:154985775-155093666
GeneTranscriptPositionBiotype
ENSMUSG00000055746 (Magea2)
melanoma antigen, family A, 2 		ENSMUST00000069477 (Magea2-201) 155027201-155033292 protein_coding
ENSMUST00000112559 (Magea2-001) 155027484-155032500 protein_coding
ENSMUST00000178950 (Magea2-202) 155027487-155093666 protein_coding
ENSMUSG00000079349 (Magea5)
melanoma antigen, family A, 5 		ENSMUST00000069556 (Magea5-001) 155053345-155063145 protein_coding
ENSMUST00000169540 (Magea5-201) 155053061-155061553 protein_coding
ENSMUSG00000079350 (Magea8)
melanoma antigen, family A, 8 		ENSMUST00000070141 (Magea8-001) 154985775-154995850 protein_coding
ENSMUSG00000096644 (Magea1)
melanoma antigen, family A, 1 		ENSMUST00000078193 (Magea1-001) 155088686-155089793 protein_coding
CIL_0001AT_0009 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000094196-ENSMUSG00000079350 CGP 10090 X:154948543-154995850
GeneTranscriptPositionBiotype
ENSMUSG00000079350 (Magea8)
melanoma antigen, family A, 8 		ENSMUST00000070141 (Magea8-001) 154985775-154995850 protein_coding
ENSMUSG00000083554 (Gm6645)
predicted gene 6645 		ENSMUST00000118505 (Gm6645-001) 154971207-154974721 processed_pseudogene
ENSMUSG00000094196 (Magea3)
melanoma antigen, family A, 3 		ENSMUST00000079867 (Magea3-001) 154948543-154949505 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AT_0001ENSG00000123584ENST00000243314ENSG00000156009ENST00000286482ENST00000345830ENST00000493910ENST00000535454ENST00000542674ENSG00000224732ENST00000436482ENSG00000230899ENST00000427671CIL_0001AT_0002ENSG00000213401ENST00000357916ENST00000393869ENST00000393900ENSG00000231447ENST00000437309CIL_0001AT_0003ENSG00000221867ENST00000370278ENST00000417212ENST00000598245ENSG00000268902ENST00000535353ENST00000598036CIL_0001AT_0004ENSG00000197172ENST00000329342ENST00000412733ENST00000457643ENST00000616035ENSG00000268916ENST00000599845ENST00000617158CIL_0001AT_0005ENSMUSG00000055746ENSMUST00000069477ENSMUST00000112559ENSMUST00000178950ENSMUSG00000079349ENSMUST00000069556ENSMUST00000169540ENSMUSG00000096644ENSMUST00000078193CIL_0001AT_0006ENSMUSG00000063728ENSMUST00000076986ENSMUST00000112562ENSMUSG00000094196ENSMUST00000079867CIL_0001AT_0007ENSMUSG00000079349ENSMUST00000069556ENSMUST00000169540ENSMUSG00000096644ENSMUST00000078193CIL_0001AT_0008ENSMUSG00000055746ENSMUST00000069477ENSMUST00000112559ENSMUST00000178950ENSMUSG00000079349ENSMUST00000069556ENSMUST00000169540ENSMUSG00000079350ENSMUST00000070141ENSMUSG00000096644ENSMUST00000078193CIL_0001AT_0009ENSMUSG00000079350ENSMUST00000070141ENSMUSG00000083554ENSMUST00000118505ENSMUSG00000094196ENSMUST00000079867
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AT_0001ENSG00000123584ENST00000243314ENSG00000156009ENST00000286482ENST00000345830ENST00000493910ENST00000542674ENSG00000224732ENST00000436482ENSG00000230899ENST00000427671CIL_0001AT_0002ENSG00000213401ENST00000357916ENST00000393869ENSG00000231447ENST00000437309CIL_0001AT_0003ENSG00000221867ENST00000370278ENST00000598245ENSG00000268902ENST00000535353CIL_0001AT_0004ENSG00000197172ENST00000329342ENST00000412733ENST00000616035ENSG00000268916ENST00000599845CIL_0001AT_0005ENSMUSG00000055746ENSMUST00000069477ENSMUST00000112559ENSMUST00000178950ENSMUSG00000079349ENSMUST00000069556ENSMUST00000169540ENSMUSG00000096644ENSMUST00000078193CIL_0001AT_0006ENSMUSG00000063728ENSMUST00000076986ENSMUST00000112562ENSMUSG00000094196ENSMUST00000079867CIL_0001AT_0007ENSMUSG00000079349ENSMUST00000069556ENSMUST00000169540ENSMUSG00000096644ENSMUST00000078193CIL_0001AT_0008ENSMUSG00000055746ENSMUST00000069477ENSMUST00000112559ENSMUST00000178950ENSMUSG00000079349ENSMUST00000069556ENSMUST00000169540ENSMUSG00000079350ENSMUST00000070141ENSMUSG00000096644ENSMUST00000078193CIL_0001AT_0009ENSMUSG00000079350ENSMUST00000070141ENSMUSG00000083554ENSMUST00000118505ENSMUSG00000094196ENSMUST00000079867
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123584 ENST00000243314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.42
ENSG00000156009 ENST00000286482 N/A 0.017±0.00 0.016±0.01 N/A 0.026±0.00 0.008±0.00 N/A 0.071±0.00 N/A N/A 0.024±0.00 13.864±2.63 0.964±0.34
ENST00000345830 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.602±0.00 N/A N/A N/A
ENST00000493910 N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542674 N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A N/A N/A 0.159±0.00
ENSG00000224732 ENST00000436482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00
ENSG00000230899 ENST00000427671 N/A 0.090±0.00 N/A 0.120±0.00 N/A N/A N/A N/A N/A N/A 0.121±0.04 0.164±0.06 0.165±0.08
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213401 ENST00000357916 N/A 0.054±0.00 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 1.790±0.49
ENST00000393869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.786±0.00
ENST00000393900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231447 ENST00000437309 N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.04
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000221867 ENST00000370278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.07 2.212±1.42
ENST00000417212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.024±0.42
ENSG00000268902 ENST00000535353 N/A N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A 0.212±0.08
ENST00000598036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000197172 ENST00000329342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 1.935±1.49
ENST00000412733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A
ENST00000457643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 2.179±0.00
ENSG00000268916 ENST00000599845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.08
ENST00000617158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055746 ENSMUST00000069477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A 0.105±0.03
ENSMUST00000112559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.01
ENSMUST00000178950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.08
ENSMUSG00000079349 ENSMUST00000069556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.02 0.249±0.15
ENSMUST00000169540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.00 0.191±0.16
ENSMUSG00000096644 ENSMUST00000078193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000063728 ENSMUST00000076986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.02 0.098±0.03
ENSMUST00000112562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 0.229±0.00
ENSMUSG00000094196 ENSMUST00000079867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 0.191±0.10
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000079349 ENSMUST00000069556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.02 0.249±0.15
ENSMUST00000169540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.00 0.191±0.16
ENSMUSG00000096644 ENSMUST00000078193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055746 ENSMUST00000069477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A 0.105±0.03
ENSMUST00000112559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.01
ENSMUST00000178950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.08
ENSMUSG00000079349 ENSMUST00000069556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.02 0.249±0.15
ENSMUST00000169540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.00 0.191±0.16
ENSMUSG00000079350 ENSMUST00000070141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.02 0.430±0.18
ENSMUSG00000096644 ENSMUST00000078193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000079350 ENSMUST00000070141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.02 0.430±0.18
ENSMUSG00000083554 ENSMUST00000118505 0.029±0.00 0.069±0.00 N/A 0.041±0.00 N/A 0.013±0.00 0.016±0.00 0.006±0.00 N/A N/A N/A 0.321±0.04 0.022±0.01
ENSMUSG00000094196 ENSMUST00000079867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 0.191±0.10

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