C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 438
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183621 ZNF438 9606 - 10:30820207-31031937 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331737 ZNF438-001 30844634-30984426 protein_coding
  ENST00000361310 ZNF438-003 30844634-30984426 protein_coding
  ENST00000375311 ZNF438-002 30844781-31031925 protein_coding
  ENST00000413025 ZNF438-201 30844638-31031937 protein_coding
  ENST00000436087 ZNF438-202 30844638-31031937 protein_coding
  ENST00000442986 ZNF438-203 30844638-31031937 protein_coding
  ENST00000452305 ZNF438-204 30844638-31031937 protein_coding
  ENST00000538351 ZNF438-005 30844772-30999517 protein_coding
  ENST00000609683 ZNF438-004 30820207-30923388 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331737ENST00000361310ENST00000375311ENST00000413025ENST00000436087ENST00000442986ENST00000452305ENST00000538351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331737 N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A
ENST00000361310 N/A 0.611±0.00 N/A 0.546±0.00 N/A 0.763±0.00 0.335±0.00 N/A 0.688±0.27 0.612±0.00 N/A N/A N/A N/A
ENST00000375311 1.916±0.00 2.086±0.00 N/A 0.637±0.37 2.752±0.00 1.679±0.00 0.657±0.46 0.791±0.69 0.606±0.00 1.452±0.00 1.013±0.77 1.679±0.45 0.997±0.09 2.916±0.43
ENST00000413025 N/A 0.427±0.00 0.604±0.00 N/A N/A 0.459±0.01 0.438±0.12 0.473±0.00 N/A 1.172±0.03 N/A 1.227±0.72 0.888±0.53 0.743±0.00
ENST00000436087 N/A N/A N/A 0.437±0.27 0.351±0.00 N/A N/A 0.536±0.00 N/A N/A N/A 1.204±0.00 0.351±0.00 N/A
ENST00000442986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.177±0.00
ENST00000452305 N/A N/A N/A N/A 0.697±0.00 N/A 0.627±0.00 N/A N/A N/A N/A 0.663±0.00 N/A N/A
ENST00000538351 0.647±0.00 N/A N/A N/A 0.351±0.00 0.622±0.00 0.923±0.59 N/A 0.529±0.00 N/A 1.712±0.00 N/A 0.274±0.00 0.858±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R6 CIL_0000R6_0001 CGP 10:30820207-31529814

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061311 znf438 zinc finger protein 438 protein_coding Danio_rerio
ENSMUSG00000050945 Zfp438 zinc finger protein 438 protein_coding Mus_musculus

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