C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000R6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183621-ENSG00000148516 CGP 9606 10:30820207-31529814
GeneTranscriptPositionBiotype
ENSG00000148516 (ZEB1)
zinc finger E-box binding homeobox 1 		ENST00000320985 (ZEB1-018) 31319125-31529202 protein_coding
ENST00000361642 (ZEB1-201) 31319172-31529813 protein_coding
ENST00000424869 (ZEB1-004) 31319216-31520200 protein_coding
ENST00000437844 (ZEB1-001) 31319216-31529814 nonsense_mediated_decay
ENST00000446923 (ZEB1-202) 31321135-31529813 protein_coding
ENST00000488625 (ZEB1-005) 31318495-31529202 retained_intron
ENST00000493835 (ZEB1-006) 31355144-31461236 processed_transcript
ENST00000542815 (ZEB1-016) 31319222-31527294 protein_coding
ENST00000542879 (ZEB1-017) 31318818-31527276 retained_intron
ENST00000557827 (ZEB1-013) 31321474-31514651 retained_intron
ENST00000558440 (ZEB1-003) 31319213-31520421 protein_coding
ENST00000558655 (ZEB1-009) 31320547-31524007 retained_intron
ENST00000558832 (ZEB1-021) 31322010-31358590 processed_transcript
ENST00000558863 (ZEB1-019) 31320113-31520811 retained_intron
ENST00000559476 (ZEB1-012) 31321152-31520214 protein_coding
ENST00000559496 (ZEB1-011) 31321135-31514657 retained_intron
ENST00000559858 (ZEB1-015) 31319212-31524007 processed_transcript
ENST00000560196 (ZEB1-007) 31318783-31502447 retained_intron
ENST00000560721 (ZEB1-002) 31319212-31527294 protein_coding
ENST00000560909 (ZEB1-023) 31381723-31461180 retained_intron
ENST00000561061 (ZEB1-010) 31320606-31514707 processed_transcript
ENST00000561212 (ZEB1-020) 31320126-31520811 protein_coding
ENST00000561304 (ZEB1-008) 31318837-31514681 retained_intron
ENST00000606161 (ZEB1-022) 31321690-31502406 processed_transcript
ENST00000606671 (ZEB1-024) 31321621-31502423 processed_transcript
ENSG00000183621 (ZNF438)
zinc finger protein 438 		ENST00000331737 (ZNF438-001) 30844634-30984426 protein_coding
ENST00000361310 (ZNF438-003) 30844634-30984426 protein_coding
ENST00000375311 (ZNF438-002) 30844781-31031925 protein_coding
ENST00000413025 (ZNF438-201) 30844638-31031937 protein_coding
ENST00000436087 (ZNF438-202) 30844638-31031937 protein_coding
ENST00000442986 (ZNF438-203) 30844638-31031937 protein_coding
ENST00000452305 (ZNF438-204) 30844638-31031937 protein_coding
ENST00000538351 (ZNF438-005) 30844772-30999517 protein_coding
ENST00000609683 (ZNF438-004) 30820207-30923388 nonsense_mediated_decay
ENSG00000230397 (SPTLC1P1)
serine palmitoyltransferase, long chain base subunit 1 pseudogene 1 		ENST00000447199 (SPTLC1P1-001) 31360955-31361215 transcribed_processed_pseudogene
ENSG00000237135 (DDX10P1)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 pseudogene 1 		ENST00000448545 (DDX10P1-001) 30919012-30921235 processed_pseudogene
ENSG00000272381 (RP11-192P3.4)
 ENST00000605929 (RP11-192P3.4-001) 31187883-31261910 lincRNA
ENSG00000272914 (RP11-330O11.3)
 ENST00000608729 (RP11-330O11.3-001) 30831828-30833387 sense_intronic
CIL_0000R6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050945-ENSMUSG00000024238 CGP 10090 18:5210031-5775467
GeneTranscriptPositionBiotype
ENSMUSG00000024238 (Zeb1)
zinc finger E-box binding homeobox 1 		ENSMUST00000025081 (Zeb1-001) 5591860-5775467 protein_coding
ENSMUST00000159390 (Zeb1-008) 5591891-5766533 protein_coding
ENSMUST00000159477 (Zeb1-005) 5603744-5642873 processed_transcript
ENSMUST00000160522 (Zeb1-002) 5591872-5706884 retained_intron
ENSMUST00000160910 (Zeb1-006) 5593602-5759057 protein_coding
ENSMUST00000161295 (Zeb1-007) 5591912-5766570 nonsense_mediated_decay
ENSMUST00000162892 (Zeb1-009) 5594203-5767742 retained_intron
ENSMUST00000175739 (Zeb1-004) 5593308-5641459 processed_transcript
ENSMUST00000175925 (Zeb1-010) 5591891-5766916 nonsense_mediated_decay
ENSMUST00000177030 (Zeb1-003) 5731081-5772804 processed_transcript
ENSMUST00000177070 (Zeb1-011) 5593861-5759184 processed_transcript
ENSMUSG00000050945 (Zfp438)
zinc finger protein 438 		ENSMUST00000063989 (Zfp438-201) 5210031-5334439 protein_coding
ENSMUSG00000063087 (Gm10125)
predicted gene 10125 		ENSMUST00000074702 (Gm10125-001) 5565650-5592382 antisense
ENSMUST00000160925 (Gm10125-005) 5525365-5592191 antisense
ENSMUST00000161096 (Gm10125-003) 5565650-5593505 antisense
ENSMUST00000161383 (Gm10125-004) 5574985-5592190 antisense
ENSMUST00000161921 (Gm10125-002) 5491503-5592393 antisense
ENSMUST00000177190 (Gm10125-006) 5518415-5521109 retained_intron
ENSMUST00000178464 (Gm10125-201) 5525293-5592393 processed_transcript
ENSMUSG00000090078 (Gm16147)
predicted gene 16147 		ENSMUST00000162143 (Gm16147-001) 5611558-5611930 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R6_0001ENSG00000148516ENST00000320985ENST00000361642ENST00000424869ENST00000437844ENST00000446923ENST00000488625ENST00000493835ENST00000542815ENST00000542879ENST00000557827ENST00000558440ENST00000558655ENST00000558832ENST00000558863ENST00000559476ENST00000559496ENST00000559858ENST00000560196ENST00000560721ENST00000560909ENST00000561061ENST00000561212ENST00000561304ENST00000606161ENST00000606671ENSG00000183621ENST00000331737ENST00000361310ENST00000375311ENST00000413025ENST00000436087ENST00000442986ENST00000452305ENST00000538351ENST00000609683ENSG00000230397ENST00000447199ENSG00000237135ENST00000448545ENSG00000272381ENST00000605929ENSG00000272914ENST00000608729CIL_0000R6_0002ENSMUSG00000024238ENSMUST00000025081ENSMUST00000159390ENSMUST00000159477ENSMUST00000160522ENSMUST00000160910ENSMUST00000161295ENSMUST00000162892ENSMUST00000175739ENSMUST00000175925ENSMUST00000177030ENSMUST00000177070ENSMUSG00000050945ENSMUST00000063989ENSMUSG00000063087ENSMUST00000074702ENSMUST00000160925ENSMUST00000161096ENSMUST00000161383ENSMUST00000161921ENSMUST00000177190ENSMUST00000178464ENSMUSG00000090078ENSMUST00000162143
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R6_0001ENSG00000148516ENST00000320985ENST00000361642ENST00000424869ENST00000437844ENST00000446923ENST00000488625ENST00000542815ENST00000542879ENST00000557827ENST00000558440ENST00000558655ENST00000559858ENST00000560721ENSG00000183621ENST00000331737ENST00000361310ENST00000375311ENST00000413025ENST00000436087ENST00000442986ENST00000452305ENST00000538351ENSG00000230397ENST00000447199ENSG00000237135ENST00000448545ENSG00000272381ENST00000605929ENSG00000272914ENST00000608729CIL_0000R6_0002ENSMUSG00000024238ENSMUST00000025081ENSMUST00000177030ENSMUSG00000050945ENSMUST00000063989ENSMUSG00000063087ENSMUST00000074702ENSMUST00000161096ENSMUST00000161921ENSMUST00000178464ENSMUSG00000090078ENSMUST00000162143
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148516 ENST00000320985 11.603±0.00 4.575±0.00 N/A 7.286±0.00 5.094±2.35 10.748±9.40 4.013±2.34 0.980±0.00 4.864±3.79 12.393±0.00 15.006±0.00 2.213±1.65 2.456±0.92 5.510±2.61
ENST00000361642 2.843±0.00 N/A N/A N/A N/A N/A N/A 0.799±0.00 N/A N/A N/A 1.314±0.11 1.191±0.48 N/A
ENST00000424869 N/A N/A N/A N/A 9.045±0.00 10.238±0.00 7.016±0.00 N/A 21.203±0.00 10.281±0.00 N/A N/A N/A N/A
ENST00000437844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.902±0.00 N/A N/A
ENST00000446923 N/A N/A N/A 2.153±0.28 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488625 N/A N/A N/A N/A 1.385±0.00 N/A 1.365±0.00 0.654±0.00 N/A 2.733±0.00 0.365±0.00 0.372±0.00 N/A 1.734±0.00
ENST00000493835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542815 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.387±0.00 N/A N/A N/A N/A
ENST00000542879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.957±0.00 N/A N/A 2.577±0.00
ENST00000557827 N/A N/A N/A N/A N/A N/A N/A 2.760±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.048±0.00 N/A N/A N/A
ENST00000558655 N/A N/A 1.838±0.00 N/A N/A N/A 3.562±0.00 N/A 8.487±0.00 N/A N/A 2.346±0.00 N/A N/A
ENST00000558832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559858 N/A N/A N/A 4.275±0.00 7.280±0.00 3.137±0.00 N/A N/A 9.139±0.00 4.586±0.00 2.161±0.00 N/A N/A N/A
ENST00000560196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560721 N/A N/A 0.580±0.00 2.571±0.00 N/A N/A N/A N/A N/A N/A N/A 1.122±0.00 N/A N/A
ENST00000560909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183621 ENST00000331737 N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A
ENST00000361310 N/A 0.611±0.00 N/A 0.546±0.00 N/A 0.763±0.00 0.335±0.00 N/A 0.688±0.27 0.612±0.00 N/A N/A N/A N/A
ENST00000375311 1.916±0.00 2.086±0.00 N/A 0.637±0.37 2.752±0.00 1.679±0.00 0.657±0.46 0.791±0.69 0.606±0.00 1.452±0.00 1.013±0.77 1.679±0.45 0.997±0.09 2.916±0.43
ENST00000413025 N/A 0.427±0.00 0.604±0.00 N/A N/A 0.459±0.01 0.438±0.12 0.473±0.00 N/A 1.172±0.03 N/A 1.227±0.72 0.888±0.53 0.743±0.00
ENST00000436087 N/A N/A N/A 0.437±0.27 0.351±0.00 N/A N/A 0.536±0.00 N/A N/A N/A 1.204±0.00 0.351±0.00 N/A
ENST00000442986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.177±0.00
ENST00000452305 N/A N/A N/A N/A 0.697±0.00 N/A 0.627±0.00 N/A N/A N/A N/A 0.663±0.00 N/A N/A
ENST00000538351 0.647±0.00 N/A N/A N/A 0.351±0.00 0.622±0.00 0.923±0.59 N/A 0.529±0.00 N/A 1.712±0.00 N/A 0.274±0.00 0.858±0.00
ENST00000609683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230397 ENST00000447199 N/A N/A N/A N/A N/A 0.652±0.00 N/A N/A 3.544±0.00 N/A N/A 0.082±0.00 N/A N/A
ENSG00000237135 ENST00000448545 0.036±0.00 0.031±0.00 0.204±0.00 0.066±0.06 0.293±0.20 0.179±0.15 0.067±0.02 N/A 0.009±0.00 0.663±0.00 0.043±0.01 0.197±0.20 0.124±0.00 0.141±0.00
ENSG00000272381 ENST00000605929 0.034±0.00 0.175±0.00 0.119±0.00 0.102±0.00 0.128±0.05 0.102±0.03 0.159±0.12 0.033±0.01 0.067±0.02 0.100±0.00 0.030±0.00 0.058±0.05 0.071±0.00 0.110±0.00
ENSG00000272914 ENST00000608729 0.323±0.00 0.336±0.00 0.113±0.00 0.226±0.04 0.808±0.00 0.044±0.02 0.150±0.10 0.102±0.00 0.104±0.07 0.315±0.14 0.121±0.02 0.206±0.07 0.056±0.02 0.192±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024238 ENSMUST00000025081 7.993±2.70 2.705±0.00 7.067±1.98 10.000±6.23 6.535±2.01 1.556±0.37 6.263±0.24 2.118±0.85 2.070±1.14 8.594±0.98 4.888±1.10 6.884±2.72 2.031±0.79 1.886±0.52
ENSMUST00000159390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177030 N/A 2.502±0.40 N/A 15.363±0.00 2.104±0.00 N/A N/A N/A N/A N/A N/A 4.755±3.57 1.583±0.59 2.131±0.00
ENSMUST00000177070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050945 ENSMUST00000063989 1.119±0.32 0.985±0.17 1.392±0.07 0.804±0.33 1.510±0.46 0.701±0.10 1.307±0.15 1.046±0.15 0.426±0.12 1.620±0.31 0.971±0.16 1.589±0.47 0.656±0.33 2.970±0.13
ENSMUSG00000063087 ENSMUST00000074702 N/A N/A N/A N/A N/A N/A N/A N/A 0.894±0.00 N/A N/A N/A N/A 2.457±0.65
ENSMUST00000160925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161096 N/A N/A N/A N/A N/A N/A N/A N/A 0.352±0.00 N/A N/A 1.187±0.00 N/A N/A
ENSMUST00000161383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.685±0.26
ENSMUST00000177190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178464 N/A 5.877±0.74 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090078 ENSMUST00000162143 N/A N/A 0.057±0.02 0.153±0.00 N/A N/A 0.336±0.00 N/A 0.074±0.02 N/A N/A 0.185±0.03 0.148±0.06 0.166±0.00

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