C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 3, subunit C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184110 EIF3C 9606 + 16:28688558-28735730 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331666 EIF3C-001 28711363-28735730 protein_coding
  ENST00000395587 EIF3C-201 28711417-28735727 protein_coding
  ENST00000563139 EIF3C-018 28712037-28714412 protein_coding
  ENST00000564243 EIF3C-007 28711474-28735596 protein_coding
  ENST00000564839 EIF3C-013 28726262-28727072 retained_intron
  ENST00000565099 EIF3C-016 28720499-28723217 processed_transcript
  ENST00000565932 EIF3C-011 28721255-28735595 retained_intron
  ENST00000566086 EIF3C-020 28734919-28735590 retained_intron
  ENST00000566501 EIF3C-015 28688558-28735598 protein_coding
  ENST00000566519 EIF3C-019 28726699-28727543 retained_intron
  ENST00000566866 EIF3C-010 28711527-28735597 protein_coding
  ENST00000568426 EIF3C-017 28713259-28714888 protein_coding
  ENST00000569005 EIF3C-014 28732173-28735445 retained_intron
  ENST00000569690 EIF3C-012 28711463-28714409 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000564243ENST00000564839ENST00000565099ENST00000565932ENST00000566501ENST00000566866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000564243 3.311±0.00 1.384±0.00 0.257±0.00 1.229±0.00 1.563±1.35 1.049±0.94 0.918±0.89 0.608±0.54 0.842±0.57 1.890±1.67 3.266±3.15 1.649±1.15 1.977±0.41 1.730±0.51
ENST00000564839 N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000565099 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A 0.878±0.00 N/A N/A
ENST00000565932 0.266±0.00 0.581±0.00 0.575±0.00 0.170±0.07 0.461±0.05 0.369±0.16 0.127±0.03 0.753±0.00 0.230±0.02 0.440±0.23 N/A 0.839±0.36 0.317±0.00 1.206±0.00
ENST00000566501 N/A N/A N/A N/A N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000566866 0.563±0.00 N/A N/A 0.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.968±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IEA:IC translation initiation factor activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005852 IEA:IDA eukaryotic translation initiation factor 3 complex
GO:0006412 TAS translation
GO:0006413 IEA:IC translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0010467 TAS gene expression
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0031369 IEA translation initiation factor binding
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016443 eif3c eukaryotic translation initiation factor 3, subunit C protein_coding Danio_rerio
ENSMUSG00000030738 Eif3c eukaryotic translation initiation factor 3, subunit C protein_coding Mus_musculus

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