C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564243 EIF3C-007 ENSG00000184110 9606 + 16:28711474-28735596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000564243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000564243 3.311±0.00 1.384±0.00 0.257±0.00 1.229±0.00 1.563±1.35 1.049±0.94 0.918±0.89 0.608±0.54 0.842±0.57 1.890±1.67 3.266±3.15 1.649±1.15 1.977±0.41 1.730±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IC:IEA translation initiation factor activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005852 IDA:IEA eukaryotic translation initiation factor 3 complex
GO:0006412 TAS translation
GO:0006413 IC:IEA translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0010467 TAS gene expression
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0031369 IEA translation initiation factor binding
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032992 Eif3c-001 protein_coding Mus_musculus 0 2926
ENSMUST00000120465 Gm11224-001 processed_pseudogene Mus_musculus 0 1208
ENSMUST00000180459 G730046D07Rik-201 protein_coding Mus_musculus 1e-31 143

Loading