C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor suppressing subtransferable candidate 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184281 TSSC4 9606 + 11:2400488-2403878 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333256 TSSC4-001 2400536-2403876 protein_coding
  ENST00000380992 TSSC4-003 2400628-2403701 protein_coding
  ENST00000380996 TSSC4-002 2400488-2403878 protein_coding
  ENST00000435795 TSSC4-005 2400763-2402971 protein_coding
  ENST00000437110 TSSC4-004 2400756-2403243 protein_coding
  ENST00000440813 TSSC4-006 2402100-2403448 protein_coding
  ENST00000451491 TSSC4-201 2402293-2403875 protein_coding
  ENST00000467308 TSSC4-009 2403101-2403876 processed_transcript
  ENST00000485682 TSSC4-007 2401018-2402964 protein_coding
  ENST00000496468 TSSC4-008 2402136-2403207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333256ENST00000380992ENST00000380996ENST00000437110ENST00000440813ENST00000451491ENST00000467308ENST00000485682ENST00000496468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333256 6.989±0.00 8.013±0.00 N/A 2.999±2.37 7.160±0.00 9.748±0.00 0.824±0.68 8.575±0.00 0.841±0.57 3.809±0.00 6.962±0.00 11.819±7.79 6.731±1.03 19.597±0.00
ENST00000380992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.414±0.00
ENST00000380996 N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A 2.214±0.00 1.105±0.00 N/A 3.642±0.00 N/A 19.651±0.00
ENST00000437110 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.681±0.00 N/A N/A N/A N/A
ENST00000440813 N/A N/A N/A N/A N/A N/A 1.361±0.50 N/A N/A N/A N/A N/A N/A N/A
ENST00000451491 7.841±0.00 9.705±0.00 0.087±0.00 4.165±2.98 4.748±3.80 3.887±3.51 2.723±2.36 4.332±3.56 1.619±0.00 6.056±0.00 9.155±6.42 10.900±7.69 23.621±2.66 11.856±0.00
ENST00000467308 9.709±0.00 20.367±0.00 1.555±0.00 N/A 12.819±0.00 8.106±0.00 N/A N/A 1.814±0.00 N/A N/A 23.767±0.00 9.575±0.00 27.749±3.87
ENST00000485682 N/A N/A 0.374±0.00 N/A N/A N/A N/A N/A N/A 0.960±0.00 N/A N/A N/A N/A
ENST00000496468 N/A N/A N/A N/A N/A N/A 0.292±0.00 2.607±0.00 N/A 0.386±0.00 N/A 6.634±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BT CIL_0009BT_0001 VISTA 11:2074187-2675527
CIL_0008VI CIL_0008VI_0001 VISTA 11:2150916-2751083
CIL_0008FP CIL_0008FP_0001 VISTA 11:2232763-2834370
CIL_0008A3 CIL_0008A3_0001 VISTA 11:2289701-2893486

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036144 TSSC4 tumor suppressing subtransferable candidate 4 protein_coding Danio_rerio
ENSMUSG00000045752 Tssc4 tumor-suppressing subchromosomal transferable fragment 4 protein_coding Mus_musculus

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