C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor-suppressing subchromosomal transferable fragment 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045752 Tssc4 10090 + 7:143069249-143071093 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060433 Tssc4-001 143069249-143071093 protein_coding
  ENSMUST00000105920 Tssc4-002 143069368-143071087 protein_coding
  ENSMUST00000133410 Tssc4-003 143069341-143070546 protein_coding
  ENSMUST00000137856 Tssc4-005 143069544-143070609 protein_coding
  ENSMUST00000147995 Tssc4-004 143069424-143070545 protein_coding
  ENSMUST00000177841 Tssc4-201 143069368-143071087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060433ENSMUST00000105920ENSMUST00000133410ENSMUST00000137856ENSMUST00000147995ENSMUST00000177841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060433 7.380±1.43 N/A 6.583±2.46 9.669±3.05 3.958±0.98 7.231±1.74 1.754±0.19 4.309±1.08 7.964±4.93 4.323±1.03 1.770±0.49 12.274±2.50 4.935±1.20 3.207±0.91
ENSMUST00000105920 N/A N/A N/A 9.518±0.00 6.844±0.00 N/A 1.979±0.00 3.895±0.00 N/A 5.991±0.12 N/A N/A 9.329±0.00 3.917±0.00
ENSMUST00000133410 7.606±2.33 13.012±2.68 6.179±1.35 12.178±3.75 7.771±1.24 9.697±1.61 2.834±0.66 5.614±0.90 4.745±2.43 6.534±0.57 1.540±0.00 15.366±3.44 4.201±0.15 5.923±0.34
ENSMUST00000137856 7.141±1.31 8.395±2.49 N/A 9.193±0.00 5.229±0.91 N/A 1.693±0.19 3.939±0.70 2.485±0.17 N/A 1.861±0.73 7.876±2.53 5.300±2.24 5.861±0.52
ENSMUST00000147995 N/A 17.906±2.62 N/A N/A 12.534±2.53 10.273±1.68 2.775±0.60 5.473±0.00 7.709±4.02 7.771±1.55 N/A 13.527±3.21 N/A N/A
ENSMUST00000177841 7.976±1.05 5.418±1.02 10.469±0.98 15.075±2.42 5.514±1.51 8.518±1.88 3.739±1.05 8.616±1.40 8.082±4.69 8.032±0.82 2.621±1.06 7.408±2.29 8.276±1.88 4.465±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BT CIL_0009BT_0002 VISTA 7:142749845-143351046
CIL_0008VI CIL_0008VI_0002 VISTA 7:142812060-143412968
CIL_0008FP CIL_0008FP_0002 VISTA 7:142853813-143455333
CIL_0008A3 CIL_0008A3_0002 VISTA 7:142895498-143499796

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036144 TSSC4 tumor suppressing subtransferable candidate 4 protein_coding Danio_rerio
ENSG00000184281 TSSC4 tumor suppressing subtransferable candidate 4 protein_coding Homo_sapiens

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