C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: slit homolog 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184347 SLIT3 9606 - 5:168661733-169301129 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332966 SLIT3-002 168666225-169300782 protein_coding
  ENST00000404867 SLIT3-201 168661733-168883338 protein_coding
  ENST00000518092 SLIT3-007 168683966-168696311 processed_transcript
  ENST00000518140 SLIT3-003 168772187-169300746 retained_intron
  ENST00000519486 SLIT3-004 168752403-168792341 retained_intron
  ENST00000519560 SLIT3-001 168661740-169301129 protein_coding
  ENST00000521130 SLIT3-008 169119871-169300777 processed_transcript
  ENST00000521150 SLIT3-006 168774235-168844832 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332966ENST00000404867ENST00000519486ENST00000519560
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332966 13.331±0.00 12.021±0.00 N/A N/A 10.409±0.00 7.412±5.90 4.226±0.00 2.825±2.67 0.232±0.00 14.521±0.00 1.125±0.09 11.303±9.29 20.244±5.71 3.390±1.00
ENST00000404867 2.836±0.00 5.202±0.00 N/A N/A 4.183±2.35 1.450±0.00 N/A 2.234±0.00 0.071±0.00 1.756±0.00 0.677±0.00 N/A 2.920±0.00 3.301±0.00
ENST00000519486 N/A N/A 0.857±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519560 N/A 4.252±0.00 1.756±0.00 1.401±0.14 4.858±0.00 N/A 1.123±0.53 1.121±0.00 3.580±3.51 18.827±0.00 0.456±0.00 7.463±6.91 N/A 2.657±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 NAS:IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005739 NAS mitochondrion
GO:0007411 IDA axon guidance
GO:0008285 IEA negative regulation of cell proliferation
GO:0009887 IEA organ morphogenesis
GO:0010629 IEA negative regulation of gene expression
GO:0030308 IMP negative regulation of cell growth
GO:0032870 IEP cellular response to hormone stimulus
GO:0035385 IMP Roundabout signaling pathway
GO:0048495 IPI Roundabout binding
GO:0048846 IDA axon extension involved in axon guidance
GO:0050919 IDA negative chemotaxis
GO:0051414 IEP response to cortisol
GO:0061364 IEP apoptotic process involved in luteolysis
GO:0070100 IMP negative regulation of chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034268 slit3 slit (Drosophila) homolog 3 protein_coding Danio_rerio
ENSMUSG00000056427 Slit3 slit homolog 3 (Drosophila) protein_coding Mus_musculus

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