C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: slit homolog 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519560 SLIT3-001 ENSG00000184347 9606 - 5:168661740-169301129 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENST00000519560
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000519560 4.252±0.00 1.756±0.00 1.401±0.14 4.858±0.00 1.123±0.53 1.121±0.00 3.580±3.51 18.827±0.00 0.456±0.00 7.463±6.91 2.657±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 NAS:IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005739 NAS mitochondrion
GO:0007411 IDA axon guidance
GO:0030308 IMP negative regulation of cell growth
GO:0032870 IEP cellular response to hormone stimulus
GO:0035385 IMP Roundabout signaling pathway
GO:0048495 IPI Roundabout binding
GO:0048846 IDA axon extension involved in axon guidance
GO:0050919 IDA negative chemotaxis
GO:0051414 IEP response to cortisol
GO:0061364 IEP apoptotic process involved in luteolysis
GO:0070100 IMP negative regulation of chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069837 Slit3-001 protein_coding Mus_musculus 0 6109
ENSMUST00000124438 Slit3-004 processed_transcript Mus_musculus 0 1297
ENSDART00000066080 slit1a-201 protein_coding Danio_rerio 0 278
ENSDART00000128969 slit1a-001 protein_coding Danio_rerio 0 278

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