C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THAP domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184436 THAP7 9606 - 22:20999104-21002196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215742 THAP7-001 20999772-21002086 protein_coding
  ENST00000399133 THAP7-003 20999777-21002196 protein_coding
  ENST00000466670 THAP7-007 21000230-21002117 retained_intron
  ENST00000471073 THAP7-004 20999773-21001795 retained_intron
  ENST00000471723 THAP7-006 21001292-21002118 retained_intron
  ENST00000476667 THAP7-002 20999802-21002106 retained_intron
  ENST00000488975 THAP7-008 21000272-21001518 retained_intron
  ENST00000498406 THAP7-005 20999104-21001742 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215742ENST00000399133ENST00000471073ENST00000488975ENST00000498406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.114±0.00 N/A N/A
ENST00000399133 6.010±0.00 17.809±0.00 N/A 7.213±2.19 14.267±0.00 7.146±0.00 3.504±2.78 12.458±0.00 8.859±7.24 14.346±0.00 11.581±8.39 17.295±11.65 12.550±0.59 37.063±4.47
ENST00000471073 3.108±0.00 7.843±0.00 0.362±0.00 9.516±0.00 N/A 4.602±0.00 1.956±1.63 2.861±1.26 1.973±0.00 5.770±0.00 N/A 15.149±5.13 5.274±1.30 12.027±0.00
ENST00000488975 6.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498406 N/A N/A 0.121±0.00 N/A N/A N/A N/A 1.097±0.00 N/A 0.279±0.00 1.267±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002X2 CIL_0002X2_0001 CGP 22:20979462-21002196

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0016607 IDA nuclear speck
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0047485 IPI protein N-terminus binding
GO:0070742 IDA C2H2 zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070704 thap7 THAP domain containing 7 protein_coding Danio_rerio
ENSMUSG00000022760 Thap7 THAP domain containing 7 protein_coding Mus_musculus

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