C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THAP domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022760 Thap7 10090 - 16:17527982-17531136 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100125 Thap7-001 17527982-17531136 protein_coding
  ENSMUST00000127856 Thap7-004 17528250-17531052 retained_intron
  ENSMUST00000129297 Thap7-002 17528186-17531112 retained_intron
  ENSMUST00000136851 Thap7-006 17529003-17530656 retained_intron
  ENSMUST00000139088 Thap7-007 17528501-17529148 retained_intron
  ENSMUST00000142666 Thap7-003 17528582-17531055 protein_coding
  ENSMUST00000143805 Thap7-005 17528344-17530681 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100125ENSMUST00000127856ENSMUST00000129297ENSMUST00000136851ENSMUST00000139088ENSMUST00000142666ENSMUST00000143805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100125 9.772±0.78 18.994±4.15 12.406±2.19 8.740±4.11 9.853±4.04 11.644±2.53 4.461±0.97 17.508±2.28 9.603±2.42 10.590±1.32 3.002±0.71 19.015±7.07 8.919±4.96 16.628±7.59
ENSMUST00000127856 N/A N/A N/A 5.460±1.69 N/A 10.593±0.00 N/A N/A 2.849±0.00 N/A N/A 9.600±1.59 5.372±1.91 N/A
ENSMUST00000129297 6.914±0.85 13.671±2.96 6.183±1.50 3.912±0.87 7.766±1.26 6.445±0.92 2.639±0.33 7.865±2.10 4.498±1.51 7.856±1.39 1.984±0.84 11.329±2.31 3.542±0.29 27.936±1.73
ENSMUST00000136851 N/A N/A N/A 2.891±0.00 N/A N/A N/A N/A N/A N/A N/A 4.822±0.00 N/A N/A
ENSMUST00000139088 N/A N/A N/A N/A 1.785±0.00 N/A N/A N/A N/A N/A N/A 5.535±0.00 N/A N/A
ENSMUST00000142666 N/A N/A 5.650±0.00 N/A 5.875±3.00 5.678±0.00 N/A N/A 2.647±0.04 N/A 2.638±0.89 8.639±4.24 5.555±1.87 3.271±0.00
ENSMUST00000143805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.520±0.04 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0002X2 CIL_0002X2_0002 CGP 16:17508688-17531136

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0016607 IEA nuclear speck
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0047485 IEA protein N-terminus binding
GO:0070742 IEA C2H2 zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070704 thap7 THAP domain containing 7 protein_coding Danio_rerio
ENSG00000184436 THAP7 THAP domain containing 7 protein_coding Homo_sapiens

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