C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kinetochore associated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184445 KNTC1 9606 + 12:122527246-122626396 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333479 KNTC1-001 122527248-122626396 protein_coding
  ENST00000377192 KNTC1-007 122597243-122605087 retained_intron
  ENST00000423927 KNTC1-005 122593416-122601607 protein_coding
  ENST00000436959 KNTC1-003 122602397-122626396 protein_coding
  ENST00000450485 KNTC1-002 122527248-122626332 protein_coding
  ENST00000534995 KNTC1-016 122620042-122626375 protein_coding
  ENST00000535186 KNTC1-006 122592818-122602644 processed_transcript
  ENST00000535410 KNTC1-004 122527246-122527680 processed_transcript
  ENST00000536625 KNTC1-012 122609197-122611765 retained_intron
  ENST00000539013 KNTC1-010 122612882-122618397 retained_intron
  ENST00000541427 KNTC1-011 122613450-122620535 retained_intron
  ENST00000541466 KNTC1-008 122602823-122604997 retained_intron
  ENST00000542727 KNTC1-014 122610861-122613669 processed_transcript
  ENST00000545065 KNTC1-013 122593913-122601951 processed_transcript
  ENST00000546125 KNTC1-009 122605359-122618537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000333479ENST00000377192ENST00000423927ENST00000436959ENST00000450485ENST00000546125
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000333479 0.435±0.00 0.324±0.00 1.049±0.00 0.200±0.00 N/A N/A N/A 1.129±0.52 0.515±0.30 4.705±3.21
ENST00000377192 N/A N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A
ENST00000423927 N/A N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A N/A
ENST00000436959 N/A 0.875±0.00 0.555±0.00 N/A N/A N/A N/A 1.136±0.59 0.787±0.00 6.838±0.57
ENST00000450485 0.383±0.00 N/A N/A N/A 0.253±0.00 N/A 0.085±0.00 N/A N/A N/A
ENST00000546125 N/A N/A N/A 0.948±0.00 N/A 0.505±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PE CIL_0002PE_0001 CGP 12:122503458-122626396
CIL_0002PF CIL_0002PF_0001 CGP 12:122527246-122703343

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IEA kinetochore
GO:0000922 IDA spindle pole
GO:0005515 IPI:IEA protein binding
GO:0005634 NAS:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005828 IDA kinetochore microtubule
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006461 NAS protein complex assembly
GO:0007067 IEA mitotic nuclear division
GO:0007093 IDA mitotic cell cycle checkpoint
GO:0007096 NAS regulation of exit from mitosis
GO:0015629 IDA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028056 kntc1 kinetochore associated 1 protein_coding Danio_rerio
ENSMUSG00000029414 Kntc1 kinetochore associated 1 protein_coding Mus_musculus

Loading