C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184445-ENSG00000182782 CGP 9606 12:122527246-122703343
GeneTranscriptPositionBiotype
ENSG00000182782 (HCAR2)
hydroxycarboxylic acid receptor 2 		ENST00000328880 (HCAR2-001) 122701293-122703343 protein_coding
ENSG00000184445 (KNTC1)
kinetochore associated 1 		ENST00000333479 (KNTC1-001) 122527248-122626396 protein_coding
ENST00000377192 (KNTC1-007) 122597243-122605087 retained_intron
ENST00000423927 (KNTC1-005) 122593416-122601607 protein_coding
ENST00000436959 (KNTC1-003) 122602397-122626396 protein_coding
ENST00000450485 (KNTC1-002) 122527248-122626332 protein_coding
ENST00000534995 (KNTC1-016) 122620042-122626375 protein_coding
ENST00000535186 (KNTC1-006) 122592818-122602644 processed_transcript
ENST00000535410 (KNTC1-004) 122527246-122527680 processed_transcript
ENST00000536625 (KNTC1-012) 122609197-122611765 retained_intron
ENST00000539013 (KNTC1-010) 122612882-122618397 retained_intron
ENST00000541427 (KNTC1-011) 122613450-122620535 retained_intron
ENST00000541466 (KNTC1-008) 122602823-122604997 retained_intron
ENST00000542727 (KNTC1-014) 122610861-122613669 processed_transcript
ENST00000545065 (KNTC1-013) 122593913-122601951 processed_transcript
ENST00000546125 (KNTC1-009) 122605359-122618537 protein_coding
ENSG00000256249 (RP11-324E6.6)
 ENST00000543611 (RP11-324E6.6-001) 122687125-122715979 lincRNA
ENST00000545293 (RP11-324E6.6-002) 122714291-122715708 lincRNA
ENSG00000274191 (RP11-324E6.10)
 ENST00000613543 (RP11-324E6.10-001) 122634130-122634673 lincRNA
CIL_0002PF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029414-ENSMUSG00000045502 CGP 10090 5:123749726-123865516
GeneTranscriptPositionBiotype
ENSMUSG00000029414 (Kntc1)
kinetochore associated 1 		ENSMUST00000031366 (Kntc1-201) 123749726-123821593 protein_coding
ENSMUSG00000045502 (Hcar2)
hydroxycarboxylic acid receptor 2 		ENSMUST00000057145 (Hcar2-201) 123863570-123865516 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PF_0001ENSG00000182782ENST00000328880ENSG00000184445ENST00000333479ENST00000377192ENST00000423927ENST00000436959ENST00000450485ENST00000534995ENST00000535186ENST00000535410ENST00000536625ENST00000539013ENST00000541427ENST00000541466ENST00000542727ENST00000545065ENST00000546125ENSG00000256249ENST00000543611ENST00000545293ENSG00000274191ENST00000613543CIL_0002PF_0002ENSMUSG00000029414ENSMUST00000031366ENSMUSG00000045502ENSMUST00000057145
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PF_0001ENSG00000182782ENST00000328880ENSG00000184445ENST00000333479ENST00000377192ENST00000423927ENST00000436959ENST00000450485ENST00000546125ENSG00000256249ENST00000543611ENSG00000274191ENST00000613543CIL_0002PF_0002ENSMUSG00000029414ENSMUST00000031366ENSMUSG00000045502ENSMUST00000057145
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182782 ENST00000328880 1.994±0.00 0.054±0.00 0.256±0.00 N/A 10.581±0.00 N/A 0.112±0.06 0.940±0.36 0.527±0.52 4.308±2.20 N/A 0.387±0.33 3.551±1.11 0.355±0.10
ENSG00000184445 ENST00000333479 0.435±0.00 0.324±0.00 N/A N/A 1.049±0.00 0.200±0.00 N/A N/A N/A N/A N/A 1.129±0.52 0.515±0.30 4.705±3.21
ENST00000377192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A
ENST00000423927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A N/A
ENST00000436959 N/A 0.875±0.00 N/A N/A 0.555±0.00 N/A N/A N/A N/A N/A N/A 1.136±0.59 0.787±0.00 6.838±0.57
ENST00000450485 0.383±0.00 N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A 0.085±0.00 N/A N/A N/A
ENST00000534995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546125 N/A N/A N/A N/A N/A 0.948±0.00 N/A N/A 0.505±0.00 N/A N/A N/A N/A N/A
ENSG00000256249 ENST00000543611 N/A N/A 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274191 ENST00000613543 0.050±0.00 0.346±0.00 N/A 0.052±0.00 0.220±0.00 0.023±0.00 0.046±0.00 N/A N/A N/A N/A 0.415±0.14 0.194±0.08 0.437±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029414 ENSMUST00000031366 0.351±0.36 0.277±0.03 0.150±0.01 1.251±0.82 0.168±0.09 0.778±0.35 0.038±0.01 0.118±0.04 2.657±3.00 0.142±0.10 0.014±0.01 1.291±0.44 1.917±1.50 2.906±1.53
ENSMUSG00000045502 ENSMUST00000057145 9.466±1.60 4.702±2.58 3.049±0.42 0.050±0.04 15.305±2.69 1.039±0.26 0.450±0.35 1.039±0.22 0.271±0.22 5.574±1.28 0.088±0.04 1.452±0.47 0.249±0.22 0.045±0.02

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