C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: jagged 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184916 JAG2 9606 - 14:105140981-105168824 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331782 JAG2-001 105140981-105168824 protein_coding
  ENST00000347004 JAG2-002 105140982-105168824 protein_coding
  ENST00000546616 JAG2-003 105141755-105147358 retained_intron
  ENST00000553051 JAG2-004 105151640-105157809 retained_intron
  ENST00000553244 JAG2-005 105146962-105148394 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331782ENST00000347004ENST00000546616ENST00000553051
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331782 3.310±0.00 2.221±0.00 N/A 0.731±0.09 2.430±2.15 0.762±0.00 1.577±1.01 1.189±0.00 0.153±0.00 0.857±0.00 0.701±0.00 1.626±1.06 2.911±1.22 2.281±0.25
ENST00000347004 N/A N/A N/A 0.803±0.00 N/A N/A N/A N/A N/A 0.995±0.00 2.263±0.00 0.948±0.00 N/A N/A
ENST00000546616 5.092±0.00 6.654±0.00 0.219±0.00 3.599±0.00 13.626±0.00 1.807±1.53 5.391±0.00 1.857±1.82 0.862±0.51 4.139±0.00 3.874±2.89 2.861±1.37 3.564±1.04 5.399±2.46
ENST00000553051 N/A N/A N/A N/A N/A N/A N/A N/A 1.002±0.00 N/A N/A 4.765±3.55 4.313±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NL CIL_0006NL_0001 CGP 14:105049389-105168824
CIL_0001JY CIL_0001JY_0001 CGP 14:105140981-105181323

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0001701 IEA in utero embryonic development
GO:0003016 IEA respiratory system process
GO:0005112 IPI Notch binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0007049 NAS cell cycle
GO:0007154 IEA cell communication
GO:0007219 NAS:IEA Notch signaling pathway
GO:0007220 TAS Notch receptor processing
GO:0007275 IEA multicellular organismal development
GO:0007283 IEP spermatogenesis
GO:0008083 IDA growth factor activity
GO:0009912 ISS auditory receptor cell fate commitment
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016331 IEA morphogenesis of embryonic epithelium
GO:0030154 IDA cell differentiation
GO:0030155 IEA regulation of cell adhesion
GO:0030217 IDA T cell differentiation
GO:0030334 NAS regulation of cell migration
GO:0042127 IDA regulation of cell proliferation
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0042492 IEA gamma-delta T cell differentiation
GO:0045061 IDA thymic T cell selection
GO:1990134 IEA epithelial cell apoptotic process involved in palatal shelf morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014246 JAG2 (1 of 2) jagged 2 protein_coding Danio_rerio
ENSDARG00000021389 jag2b jagged 2b protein_coding Danio_rerio
ENSDARG00000068104 CABZ01041002.1 Delta-like protein protein_coding Danio_rerio
ENSMUSG00000002799 Jag2 jagged 2 protein_coding Mus_musculus

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