C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jagged 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331782 JAG2-001 ENSG00000184916 9606 - 14:105140981-105168824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331782
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331782 3.310±0.00 2.221±0.00 0.731±0.09 2.430±2.15 0.762±0.00 1.577±1.01 1.189±0.00 0.153±0.00 0.857±0.00 0.701±0.00 1.626±1.06 2.911±1.22 2.281±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NL CIL_0006NL_0001 CGP 14:105049389-105168824
CIL_0001JY CIL_0001JY_0001 CGP 14:105140981-105181323

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0001701 IEA in utero embryonic development
GO:0003016 IEA respiratory system process
GO:0005112 IPI Notch binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0007049 NAS cell cycle
GO:0007154 IEA cell communication
GO:0007219 NAS:IEA Notch signaling pathway
GO:0007220 TAS Notch receptor processing
GO:0007275 IEA multicellular organismal development
GO:0007283 IEP spermatogenesis
GO:0008083 IDA growth factor activity
GO:0009912 ISS auditory receptor cell fate commitment
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016331 IEA morphogenesis of embryonic epithelium
GO:0030154 IDA cell differentiation
GO:0030155 IEA regulation of cell adhesion
GO:0030217 IDA T cell differentiation
GO:0030334 NAS regulation of cell migration
GO:0042127 IDA regulation of cell proliferation
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0042492 IEA gamma-delta T cell differentiation
GO:0045061 IDA thymic T cell selection
GO:1990134 IEA epithelial cell apoptotic process involved in palatal shelf morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075827 Jag2-201 protein_coding Mus_musculus 0 4399

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