C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbonic anhydrase XIII
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185015 CA13 9606 + 8:85220587-85284073 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321764 CA13-001 85245527-85284073 protein_coding
  ENST00000517298 CA13-003 85220616-85268627 processed_transcript
  ENST00000517831 CA13-004 85220587-85250797 processed_transcript
  ENST00000518392 CA13-006 85230163-85230715 retained_intron
  ENST00000522631 CA13-005 85220927-85230336 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321764ENST00000517831ENST00000522631
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321764 0.583±0.00 0.279±0.00 N/A N/A 0.269±0.00 0.356±0.00 0.304±0.00 0.789±0.00 1.603±0.00 1.373±0.00 0.030±0.00 0.317±0.20 0.032±0.01 0.202±0.05
ENST00000517831 N/A N/A N/A 0.223±0.00 N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A 0.078±0.00 N/A
ENST00000522631 N/A N/A 1.096±0.00 N/A 0.673±0.00 N/A N/A N/A N/A 2.000±0.00 N/A 0.189±0.00 0.068±0.00 0.912±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T4 CIL_0006T4_0001 CGP 8:85214076-85284073
CIL_0006T1 CIL_0006T1_0001 CGP 8:85220587-85379014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004089 IEA carbonate dehydratase activity
GO:0005829 TAS cytosol
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding
GO:0015701 TAS bicarbonate transport
GO:0043209 IEA myelin sheath
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011166 cahz carbonic anhydrase protein_coding Danio_rerio
ENSDARG00000014488 ca2 carbonic anhydrase II protein_coding Danio_rerio
ENSMUSG00000027555 Car13 carbonic anhydrase 13 protein_coding Mus_musculus

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