C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006T1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185015-ENSG00000133742 CGP 9606 8:85220587-85379014
GeneTranscriptPositionBiotype
ENSG00000164879 (CA3)
carbonic anhydrase III, muscle specific
ENST00000285381 (CA3-001) 85438827-85449040 protein_coding
ENST00000520921 (CA3-005) 85373436-85442130 protein_coding
ENST00000522207 (CA3-004) 85438858-85442433 retained_intron
ENSG00000185015 (CA13)
carbonic anhydrase XIII
ENST00000321764 (CA13-001) 85245527-85284073 protein_coding
ENST00000517298 (CA13-003) 85220616-85268627 processed_transcript
ENST00000517831 (CA13-004) 85220587-85250797 processed_transcript
ENST00000518392 (CA13-006) 85230163-85230715 retained_intron
ENST00000522631 (CA13-005) 85220927-85230336 processed_transcript
ENSG00000257962 (RP11-219B4.6)
ENST00000551479 (RP11-219B4.6-001) 85246295-85249848 antisense
ENSG00000258256 (RP11-219B4.5)
ENST00000546501 (RP11-219B4.5-001) 85222446-85229016 antisense
ENST00000549291 (RP11-219B4.5-002) 85222731-85245717 antisense
CIL_0006T1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027555-ENSMUSG00000027556 CGP 10090 3:14641727-14808368
GeneTranscriptPositionBiotype
ENSMUSG00000027555 (Car13)
carbonic anhydrase 13
ENSMUST00000029071 (Car13-001) 14641727-14663002 protein_coding
ENSMUSG00000027556 (Car1)
carbonic anhydrase 1
ENSMUST00000094365 (Car1-001) 14766217-14778459 protein_coding
ENSMUST00000144327 (Car1-002) 14770210-14808368 protein_coding
ENSMUST00000181860 (Car1-003) 14766216-14808365 protein_coding
ENSMUSG00000084092 (Gm5843)
predicted gene 5843
ENSMUST00000121631 (Gm5843-001) 14722416-14729626 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006T1_0001ENSG00000164879ENST00000285381ENST00000520921ENST00000522207ENSG00000185015ENST00000321764ENST00000517298ENST00000517831ENST00000518392ENST00000522631ENSG00000257962ENST00000551479ENSG00000258256ENST00000546501ENST00000549291CIL_0006T1_0002ENSMUSG00000027555ENSMUST00000029071ENSMUSG00000027556ENSMUST00000094365ENSMUST00000144327ENSMUST00000181860ENSMUSG00000084092ENSMUST00000121631
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006T1_0001ENSG00000164879ENST00000285381ENST00000520921ENSG00000185015ENST00000321764ENST00000517831ENST00000522631ENSG00000257962ENST00000551479ENSG00000258256ENST00000546501ENST00000549291CIL_0006T1_0002ENSMUSG00000027555ENSMUST00000029071ENSMUSG00000027556ENSMUST00000094365ENSMUST00000144327ENSMUST00000181860ENSMUSG00000084092ENSMUST00000121631
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164879 ENST00000285381 0.137±0.00 0.089±0.00 0.060±0.00 0.203±0.03 17.006±16.00 2.907±1.74 1.999±0.69 0.346±0.17 4.525±4.47 6.957±3.25 423.777±360.28 1.398±1.37 0.177±0.00 36.016±0.00
ENST00000520921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.335±0.06 0.215±0.00 N/A
ENST00000522207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185015 ENST00000321764 0.583±0.00 0.279±0.00 N/A N/A 0.269±0.00 0.356±0.00 0.304±0.00 0.789±0.00 1.603±0.00 1.373±0.00 0.030±0.00 0.317±0.20 0.032±0.01 0.202±0.05
ENST00000517298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517831 N/A N/A N/A 0.223±0.00 N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A 0.078±0.00 N/A
ENST00000518392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522631 N/A N/A 1.096±0.00 N/A 0.673±0.00 N/A N/A N/A N/A 2.000±0.00 N/A 0.189±0.00 0.068±0.00 0.912±0.00
ENSG00000257962 ENST00000551479 N/A N/A N/A N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A 0.767±0.68
ENSG00000258256 ENST00000546501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.248±0.48
ENST00000549291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A 0.093±0.00 1.578±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027555 ENSMUST00000029071 5.913±1.54 1.299±0.32 2.285±0.53 0.169±0.03 4.882±0.69 6.064±0.53 0.742±0.07 1.681±0.23 0.424±0.35 2.687±0.81 0.168±0.09 1.880±0.42 1.024±1.12 0.199±0.08
ENSMUSG00000027556 ENSMUST00000094365 0.863±0.48 0.306±0.15 0.090±0.01 0.007±0.00 0.493±0.02 2186.357±163.85 0.060±0.01 0.063±0.04 3.883±1.55 4.601±4.35 0.146±0.03 0.190±0.06 0.047±0.02 0.101±0.05
ENSMUST00000144327 N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A 0.636±0.00 N/A N/A
ENSMUST00000181860 0.445±0.00 N/A N/A N/A 0.652±0.19 N/A N/A N/A 9.135±6.31 N/A 0.216±0.10 N/A 0.077±0.00 N/A
ENSMUSG00000084092 ENSMUST00000121631 N/A N/A N/A N/A N/A 4.341±0.93 N/A N/A 0.093±0.07 N/A N/A N/A N/A 0.115±0.00

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