C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185485 SDHAP1 9606 - 3:195959748-195990318 transcribed_unprocessed_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354559 SDHAP1-007 195963104-195967895 processed_transcript
  ENST00000413474 SDHAP1-005 195979745-195990275 processed_transcript
  ENST00000427149 SDHAP1-008 195959748-195967520 processed_transcript
  ENST00000427415 SDHAP1-003 195985446-195990318 retained_intron
  ENST00000427841 SDHAP1-002 195959921-195990279 processed_transcript
  ENST00000435731 SDHAP1-004 195982293-195990305 processed_transcript
  ENST00000440850 SDHAP1-001 195963335-195990258 transcribed_unprocessed_pseudogene
  ENST00000457601 SDHAP1-006 195971253-195975902 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354559ENST00000427149ENST00000427415ENST00000427841ENST00000435731ENST00000440850ENST00000457601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354559 0.570±0.00 N/A N/A N/A 2.248±0.00 0.931±0.00 0.479±0.00 1.301±0.00 1.022±0.00 0.834±0.00 N/A 3.137±1.27 0.530±0.00 1.829±0.00
ENST00000427149 N/A 2.361±0.00 N/A N/A N/A 0.707±0.00 1.041±0.00 2.135±0.00 0.231±0.00 2.085±0.00 N/A 1.538±1.14 1.161±0.00 N/A
ENST00000427415 N/A N/A N/A N/A N/A 0.758±0.00 N/A N/A N/A N/A N/A N/A 0.930±0.00 N/A
ENST00000427841 0.503±0.00 1.018±0.00 N/A 0.563±0.39 0.543±0.09 0.246±0.00 0.526±0.00 0.764±0.00 0.385±0.28 0.968±0.00 N/A 1.974±0.89 0.545±0.10 1.608±0.70
ENST00000435731 N/A N/A 3.212±0.00 N/A N/A N/A N/A N/A N/A N/A 2.707±0.00 N/A 1.335±0.00 N/A
ENST00000440850 N/A N/A N/A N/A N/A N/A N/A N/A 1.145±0.00 N/A 0.187±0.13 0.979±0.00 0.401±0.00 N/A
ENST00000457601 N/A N/A 7.358±0.00 1.076±0.00 3.132±0.00 5.361±0.00 2.066±1.34 10.202±0.00 4.784±0.00 6.586±0.00 1.983±1.44 3.446±0.86 N/A 12.580±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0001 VISTA 3:195819501-196421470
CIL_0003O7 CIL_0003O7_0002 CGP 3:195863364-196082189

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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