C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185917 SETD4 9606 - 21:36034541-36079389 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332131 SETD4-001 36034541-36060550 protein_coding
  ENST00000399201 SETD4-007 36043686-36079389 protein_coding
  ENST00000399205 SETD4-004 36043686-36060313 protein_coding
  ENST00000399207 SETD4-011 36043698-36060245 protein_coding
  ENST00000399208 SETD4-006 36043686-36060364 protein_coding
  ENST00000399212 SETD4-003 36034541-36060526 protein_coding
  ENST00000399215 SETD4-005 36034541-36060261 protein_coding
  ENST00000424303 SETD4-013 36045614-36060363 protein_coding
  ENST00000429161 SETD4-010 36045631-36060313 protein_coding
  ENST00000442559 SETD4-014 36048322-36060300 protein_coding
  ENST00000443703 SETD4-012 36053589-36060242 protein_coding
  ENST00000446166 SETD4-009 36045864-36060526 protein_coding
  ENST00000460704 SETD4-015 36052917-36057199 retained_intron
  ENST00000469482 SETD4-016 36036085-36043648 processed_transcript
  ENST00000481477 SETD4-002 36034541-36060385 processed_transcript
  ENST00000485865 SETD4-017 36045783-36057301 retained_intron
  ENST00000487297 SETD4-008 36034542-36043373 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332131ENST00000399201ENST00000399205ENST00000399207ENST00000399208ENST00000399212ENST00000399215ENST00000424303ENST00000429161ENST00000443703ENST00000446166ENST00000469482ENST00000481477ENST00000487297
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332131 N/A 1.147±0.00 N/A N/A N/A N/A N/A 1.299±0.00 0.444±0.04 1.015±0.00 N/A 0.906±0.15 1.074±0.57 3.253±0.86
ENST00000399201 N/A N/A N/A N/A N/A 1.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399205 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.249±0.00 N/A N/A 0.685±0.00 N/A
ENST00000399207 N/A N/A 0.882±0.00 N/A 1.856±0.00 N/A N/A N/A 0.603±0.00 1.443±0.00 N/A N/A 1.088±0.00 N/A
ENST00000399208 N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A N/A N/A N/A N/A 1.590±0.00 4.059±0.00
ENST00000399212 N/A 1.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.653±0.00 N/A 1.963±0.54
ENST00000399215 N/A N/A N/A 0.312±0.11 N/A N/A 0.105±0.00 N/A 0.483±0.00 N/A N/A 0.607±0.00 N/A N/A
ENST00000424303 N/A N/A N/A N/A 2.265±0.00 2.077±0.00 N/A 1.636±0.00 N/A N/A N/A N/A 1.122±0.00 N/A
ENST00000429161 1.551±0.00 N/A N/A 1.132±0.00 N/A N/A 0.560±0.00 N/A N/A 3.999±0.00 1.024±0.45 2.709±0.00 N/A 6.261±0.00
ENST00000443703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.351±0.00
ENST00000446166 N/A N/A N/A N/A N/A 1.752±0.00 0.890±0.00 N/A 1.364±0.00 N/A 0.816±0.00 N/A N/A N/A
ENST00000469482 N/A N/A N/A 1.305±0.00 N/A N/A 0.622±0.00 1.132±0.00 N/A N/A N/A N/A N/A N/A
ENST00000481477 0.862±0.00 N/A N/A 1.415±0.00 N/A 0.900±0.00 N/A 2.346±0.00 N/A 0.557±0.00 0.074±0.00 1.229±0.18 0.738±0.27 N/A
ENST00000487297 0.253±0.00 N/A 0.417±0.00 0.586±0.00 0.603±0.00 N/A 0.239±0.01 N/A 0.358±0.00 0.709±0.00 N/A 0.702±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z9 CIL_0006Z9_0001 CGP 21:36034541-36079389

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036592 setd4 SET domain containing 4 protein_coding Danio_rerio
ENSMUSG00000022948 Setd4 SET domain containing 4 protein_coding Mus_musculus

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