C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022948 Setd4 10090 - 16:93583457-93604063 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023669 Setd4-001 93583457-93603803 protein_coding
  ENSMUST00000113951 Setd4-201 93583460-93603815 protein_coding
  ENSMUST00000123756 Setd4-002 93583457-93603791 retained_intron
  ENSMUST00000140619 Setd4-007 93583458-93588441 processed_transcript
  ENSMUST00000141789 Setd4-006 93590946-93597416 processed_transcript
  ENSMUST00000152520 Setd4-003 93583460-93589071 retained_intron
  ENSMUST00000154355 Setd4-005 93601638-93603815 processed_transcript
  ENSMUST00000156298 Setd4-004 93591078-93604063 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023669ENSMUST00000113951ENSMUST00000123756ENSMUST00000140619ENSMUST00000152520ENSMUST00000154355
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023669 N/A 1.285±0.15 N/A N/A N/A N/A N/A N/A 0.863±0.24 N/A 0.182±0.04 1.058±0.00 0.969±0.18 N/A
ENSMUST00000113951 0.628±0.00 N/A 1.904±0.35 1.843±0.00 1.493±0.00 N/A N/A N/A 1.070±0.17 N/A 0.258±0.11 0.790±0.17 1.394±0.24 N/A
ENSMUST00000123756 N/A 1.489±0.38 N/A 1.637±0.76 0.827±0.18 1.291±0.20 N/A 0.373±0.00 0.637±0.21 0.752±0.00 0.150±0.06 0.869±0.21 1.077±0.27 N/A
ENSMUST00000140619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.850±0.00 N/A N/A
ENSMUST00000152520 0.557±0.05 0.864±0.00 0.789±0.00 1.270±0.00 0.768±0.11 0.866±0.00 0.202±0.02 0.499±0.09 0.516±0.19 0.560±0.01 0.196±0.08 0.824±0.09 0.505±0.11 0.543±0.01
ENSMUST00000154355 N/A N/A N/A N/A 2.930±0.00 4.358±0.04 N/A 2.991±0.00 N/A N/A N/A 5.497±2.16 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z9 CIL_0006Z9_0002 CGP 16:93583457-93610505

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036592 setd4 SET domain containing 4 protein_coding Danio_rerio
ENSG00000185917 SETD4 SET domain containing 4 protein_coding Homo_sapiens

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