C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calicin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185972 CCIN 9606 + 9:36169394-36171334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335119 CCIN-001 36169394-36171334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000335119
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000335119 0.149±0.00 0.208±0.00 0.131±0.01 0.137±0.00 0.038±0.00 0.081±0.00 0.010±0.00 0.096±0.00 0.129±0.04 0.458±0.34 44.892±8.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K1 CIL_0006K1_0001 CGP 9:36136536-36171334
CIL_0006K2 CIL_0006K2_0001 CGP 9:36169394-36304781

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093836 si:dkey-83f18.14 calicin protein_coding Danio_rerio
ENSMUSG00000070999 Ccin calicin protein_coding Mus_musculus

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